| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0367 |
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| Symbol | |
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| ID | 6460871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 350790 |
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| End bp | 352112 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726655 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_002017313 |
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| Protein GI | 194335519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.313304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAG GAGGGAAAAA CACCTTTTAC ATTCATACGT TCGGTTGTCA GATGAACCAG
GCGGATTCCG CAACTATAAC CTCCCTGCTG CAGCAGGCTG GTTATGTTGC AGCAGAAAGC
GAGGATCGGG CCGGAATTAT TCTGCTCAAT ACCTGTGCGG TGAGGGAGAA TGCGGTTGAT
CGTATTGAGC ATTATCTGCA ACACCTGCAG GGGCTGAAAA AAAGAGATAA ACGCTTGATA
GTCGGGATTT TAGGCTGTAT TCCGCAGCAC CAGCGGGAGG AGATGTTTGC CACCTCTCCG
GCCATTGATC TTCTTGCAGG GCCGGATACC TATCGAACCC TGCCGCAGCT TATTGAGCAG
GCCCGCTCTG GGGCAAAGCC ATTCTCGCTG GACTTCAATG TTGCTGAAAC CTATGAAGGC
ATTGATCCGG TAAGGCAGGG GTCAATCAGT GCCTTTGTTC CTGTCATGCG AGGGTGCAAC
AACATGTGCG CCTATTGCGT GGTACCCTTT ACCCGAGGTC GTGAACGAAG TCATCCCTTC
CGTGCGGTCA TGGGAGAAGT TCAGAAGCTT GTTGCATCCG GTTACAGTGA GATTACCCTT
CTCGGGCAGA ATGTCAATTC TTACGACGAT CCTGAACAAG GAGTGAATTT TGCAGCGCTG
CTTGATGCCG TCAGTTGTGC TGCTCCCCAG GCAAGAGTCC GTTTTACCAC CTCCCATCCG
AAAGATATTT CCGGTGAACT TGTTCGTACC ATTGCCAATC GCCCGAACAT CTGTAACCAT
ATCCACCTGC CAGTGCAATC CGGCTCAACA GCCACGCTCG GACGCATGAA CCGGGGTCAC
ACGATCGAAG AGTACCTGGA AAAAATAGCG CTGATTCGCT CACTTCTTCC CGGCGTTACG
CTCTCTACCG ACATCATTGC CGGCTTCTGC GGTGAGCAGG AGGAGGATCA TCAGGCCTCA
CTTGAGCTTC TTTCCACTCT TCGGTTCGAT TCAGCTTATA TGTTTTATTA CTCAACCAGA
CCCGGTACAT TTGCCGCACG TACGTTGGTG GATGATGTGC CGGAAGTGGT AAAAAAACGA
AGGCTGCAGG AGATTATTGA TCTTCAGAAT ACTATTTCGG GGGAGCTTTT TCAACAGGCG
ATTGGCTCTG TTGTGGAAGT GCTTGCTGAA TCCGAAAGCA AGCGCTCTGC CGAACAGCTC
ATGGGCCGAA CGCCAGGTAA TCGGGCAGTG GTTTTCGATC GTGAAGGGTA TCGTCCGGGC
GATTTGGTGA GGGTGCTGAT CACTGCAGCC ACATCAGCAA CCCTGACTGG CAGGCCCGTG
TGA
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| Protein sequence | MTTGGKNTFY IHTFGCQMNQ ADSATITSLL QQAGYVAAES EDRAGIILLN TCAVRENAVD
RIEHYLQHLQ GLKKRDKRLI VGILGCIPQH QREEMFATSP AIDLLAGPDT YRTLPQLIEQ
ARSGAKPFSL DFNVAETYEG IDPVRQGSIS AFVPVMRGCN NMCAYCVVPF TRGRERSHPF
RAVMGEVQKL VASGYSEITL LGQNVNSYDD PEQGVNFAAL LDAVSCAAPQ ARVRFTTSHP
KDISGELVRT IANRPNICNH IHLPVQSGST ATLGRMNRGH TIEEYLEKIA LIRSLLPGVT
LSTDIIAGFC GEQEEDHQAS LELLSTLRFD SAYMFYYSTR PGTFAARTLV DDVPEVVKKR
RLQEIIDLQN TISGELFQQA IGSVVEVLAE SESKRSAEQL MGRTPGNRAV VFDREGYRPG
DLVRVLITAA TSATLTGRPV
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