Gene Ppha_0366 details

Gene Information

• Locus tag: Ppha_0366
• ID: 6462241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 350138
• End bp: 350749
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642726654
• Product: nitrogen-fixing NifU domain protein
• Protein accession: YP_002017312
• Protein GI: 194335518
• COG category: [C] Energy production and conversion
• COG ID: [COG0822] NifU homolog involved in Fe-S cluster formation; [COG1251] NAD(P)H-nitrite reductase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.041625
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAAC CAGGTGAATG GGCATATAGC GATAAACTGA AGGAACACTT CATGAATCCC 
AAGAATATTC TCCAGGGTGA GAATACCGAT GATTTTGACG GAGTCGGCAT GGAGGGTAAT 
CTGCAGTGCG GTGATCAGAT GATGGTGGTT ATCAAGGTGG ACAAGGAAAA AGAGACCATT 
ACCGACTGTC AGTGGAAAAC GTATGGTTGT GCCAGTGCGA TTGCCAGTAC CTCGGTTTTG 
TCGGAAATGG TGAAGGGCAG GACGCTCGAT GCGGCGTTTC ATATCTCTCC CAAGGAGGTT 
GCTCTGGAAC TCGGCGGCCT GCCGGATCAC AAGATTCACT GCTCGGTGCT TGGTGACAAG 
GCGTTGCGTT CGGCTATCAA TAACTATTAT ACCCGCAACG GTCAGGAGGA GAAGGTCAAA 
CAGGAGCAGG TCAAGGTGAT TTGCCAGTGT ATGAGTATTA CTGACCATGA TATCGAGGAT 
GCCGTGCTTG AGGGGGCTCG TACCTATTTC GAACTCCAGG AGCGAACCAA ACTTGGCACG 
GTATGCGGTC AGTGCAAGGA TGAAGCTGAG CTGCTGCTTG AAAAATTCAA GCATATTCAT 
TTCGGGGCAT GA 

 

Protein sequence

MLQPGEWAYS DKLKEHFMNP KNILQGENTD DFDGVGMEGN LQCGDQMMVV IKVDKEKETI 
TDCQWKTYGC ASAIASTSVL SEMVKGRTLD AAFHISPKEV ALELGGLPDH KIHCSVLGDK 
ALRSAINNYY TRNGQEEKVK QEQVKVICQC MSITDHDIED AVLEGARTYF ELQERTKLGT 
VCGQCKDEAE LLLEKFKHIH FGA