Gene Ppha_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0341 
Symbol 
ID6461876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp328641 
End bp330440 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content38% 
IMG OID642726633 
Producthypothetical protein 
Protein accessionYP_002017291 
Protein GI194335497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTTA CAGATCAAGA ACTAACACTC CTGAAAACTG CACTTGATAG CCGATTCGTC 
CCACACCTTC CTGCACTTAT AGATCAAAAA AAATCGGTTT CTGAACGAGT AACCAAAAAT
TGCTCAAGAG CGTTAAGTGC CTTTGTGATA AAACATATTG CTGACCTCTC CGAAACAGAC
GCTTGTCAAT ATGTAACTGA TGATTTTGAC GATAAAGGAG TTGATGCAAT ATATTATCAG
GCTTCTTCTC AGACTCTTTA TTTGATTCAA TCAAAGCTGA AATTAAATGA AGAATTTTCA
CTTGATGAAG CTAACGCGTT TTGTCAAGGT GTACGAAAAA TTATAAGACA AAATTTTGAT
GATTTTAATT CTCATATCCA GAATCGCAAA GCAGAGATTG AACGAGATGT AGAAGATTGC
TCTAATATAC AACTGGTTAT CGCATATACT GGACCGAGAA TTAGTGCAAA TGCAAAACAA
GCGATACGTG AAATGCTTAC AGATATAAGC CAAGGAGAAG AGCGCTTCGT TGACACTATT
ATGGAGTATG ATGCTGAAAT AATTAAATCT AAGCTTAGTG AGTCAAATGC CTATCCACGT
GTTGATGCAA CTCTTTGGCT TGAGTGTCAA AGGGCGGTGG ACGATGGGCA TACTTCCTAT
TTCGGCCTTG TTGCATTAAA AAGCTTAGTA GATCTGCATA AACAACACGA TAAAGCTCTT
TATGTTAAAA ATATACGTAC TTTTTTAGGT CGAACAACTG ATGTTAATTC AGCAATACAA
AAAACCCTTA GGGAGCAACC CAGTGATTTC TGGTATTTAA ACAATGGGGT GACGGCTCTT
TGTGCAAACA TAGAGCCTAA AAATATGAAA GATGGAAAGA AAAAGATTCA AATTCAAGGT
ATATCCATCA TTAATGGAGC ACAGACCATT GCATCTTCAG CGACTGTTGC AAATGAAAAT
GTGGATATCA GTAGCGCAAA GGTTCTTCTT ACGTTAATTA AATCTCCACC AGAAAGTGCA
TTTGGAAAGA GCGTCACAAA GGCAAGAAAT CATCAAAATC CAGTTTCGCT TTTTAATTTT
TCTGCATTGG ATGAAGAACA GGAACGTTTA CGTCGTGATA TTGCAAATCT TAATATTGAA
TACCTTTACA AAGATGGGGT GTCTGATCAA AGTGGCAATT CAATAAGTAT CAACGAAGCG
GTATACGCCT TATCCTGTCT GCAACAGGAT CCTCGCTTTC TTGTATGGTT AAAAAAGGAG
CCAGGGAATA TCCTCGATCC TGAAACCGAA AACTACCGTT TAATATTTCC GGAAACATTG
ACGGCCTTTC GTCTCATAAA CGCTGTTATT GTATACCGAA CAATTCAGAA AAATTTAAAG
CAAAATATCC TAAGCACTAA TGGTACTGAG AGATTATGTT ACAAACATGG GAATTTAGTA
CTTGCATCTG TGCTTATTAA GCGATTGTTA AAAGAAATTG ATATGCCAAG TGTAATTAGG
ATGGAAGTTC TTGAGGAGAA GCTGAGCTAT CCCTTTGATC AAGCACGCAA CTCGCTTTGG
GCGTATGTGA CACCCGTAGT TCCACCATCC AATGAAGCTG GCCCTGGCCC GCTTGCTCTT
TTTAAAAACC AAGCTCATAC AATTAGTGTG ATGAAGTCAA CAATGATTGA TAATTTTGGC
CTTCTAAATG ATCCGGTTAT TGCAATTAAA GAGAGACGGC AGACGGAAAA TCAACCTTAC
CCAATCGAAT TATTTAATTA TCTATCAGCA AAAGCTCCAC AAATCAGGTT TGATCAATGA
 
Protein sequence
MALTDQELTL LKTALDSRFV PHLPALIDQK KSVSERVTKN CSRALSAFVI KHIADLSETD 
ACQYVTDDFD DKGVDAIYYQ ASSQTLYLIQ SKLKLNEEFS LDEANAFCQG VRKIIRQNFD
DFNSHIQNRK AEIERDVEDC SNIQLVIAYT GPRISANAKQ AIREMLTDIS QGEERFVDTI
MEYDAEIIKS KLSESNAYPR VDATLWLECQ RAVDDGHTSY FGLVALKSLV DLHKQHDKAL
YVKNIRTFLG RTTDVNSAIQ KTLREQPSDF WYLNNGVTAL CANIEPKNMK DGKKKIQIQG
ISIINGAQTI ASSATVANEN VDISSAKVLL TLIKSPPESA FGKSVTKARN HQNPVSLFNF
SALDEEQERL RRDIANLNIE YLYKDGVSDQ SGNSISINEA VYALSCLQQD PRFLVWLKKE
PGNILDPETE NYRLIFPETL TAFRLINAVI VYRTIQKNLK QNILSTNGTE RLCYKHGNLV
LASVLIKRLL KEIDMPSVIR MEVLEEKLSY PFDQARNSLW AYVTPVVPPS NEAGPGPLAL
FKNQAHTISV MKSTMIDNFG LLNDPVIAIK ERRQTENQPY PIELFNYLSA KAPQIRFDQ