Gene Ppha_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0337 
Symbol 
ID6460886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp323694 
End bp324437 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID642726629 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002017287 
Protein GI194335493 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCT TTTATACCTC GACCCAACAT ATTGATCTTG ATGCAAGGAA CCTTGTGGTT 
GATGGTGATG AATTTCATCA TCTCGTTCGG GTTCTGCGGA AAAAAACAGG AGAGAAGATT
CTGGTCACTG ATGGCAACGG TCTGCGTTGC GAGGCCAGCA TTGCGGAGAT TGGCAAAACG
TCGTTCACTG CTGACATTCT TGCCTGCAGC CGAATTGATC GGCCAAACAC TGAAGTGACC
GTTGCCCTCT CCCTGCTCAA GGCTCCCCAG CGATTTGAAC TCTTTCTGGA AAAAGCGACC
GAGCTTGGAG TCTCCACCAT CATTCCCATG CTCACGGCGC GGACGCTCTC CCATCCATCA
AATGAAAAAG TGCAGGGCAA GCTTAACCGC TGGAGAACCA TCATGCTTTC AGCAGCCCGG
CAATCAAAAC GCCATTATCT GCCACAGCTC ACTGAGCCGC TCACCTTTAA AAAAGCTGCG
GCGCTTCAGG GTTATGATCT CAAGCTTATT CCCTATGAAC TTTCAGAGGC CCCTCCAAAG
GTGAAATGCA GCGGCAAAAA AATCCTCTTT CTCATTGGTG GTGAAGGCGG ATTCACTGCC
AATGAAATCG AGGAGGCCCG TGCCGCTGGT TTCAATGAAC TCTCTTTTGG AAAAACAATT
CTCAGGGCCG AAACCGCCGG AATTTTTGCA GTCGCATTGG TTCGCACACA GCTCCTTGAA
GAGGAGCGCA TCGAGTGGTT TTAA
 
Protein sequence
MELFYTSTQH IDLDARNLVV DGDEFHHLVR VLRKKTGEKI LVTDGNGLRC EASIAEIGKT 
SFTADILACS RIDRPNTEVT VALSLLKAPQ RFELFLEKAT ELGVSTIIPM LTARTLSHPS
NEKVQGKLNR WRTIMLSAAR QSKRHYLPQL TEPLTFKKAA ALQGYDLKLI PYELSEAPPK
VKCSGKKILF LIGGEGGFTA NEIEEARAAG FNELSFGKTI LRAETAGIFA VALVRTQLLE
EERIEWF