Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0337 |
Symbol | |
ID | 6460886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 323694 |
End bp | 324437 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642726629 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002017287 |
Protein GI | 194335493 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCT TTTATACCTC GACCCAACAT ATTGATCTTG ATGCAAGGAA CCTTGTGGTT GATGGTGATG AATTTCATCA TCTCGTTCGG GTTCTGCGGA AAAAAACAGG AGAGAAGATT CTGGTCACTG ATGGCAACGG TCTGCGTTGC GAGGCCAGCA TTGCGGAGAT TGGCAAAACG TCGTTCACTG CTGACATTCT TGCCTGCAGC CGAATTGATC GGCCAAACAC TGAAGTGACC GTTGCCCTCT CCCTGCTCAA GGCTCCCCAG CGATTTGAAC TCTTTCTGGA AAAAGCGACC GAGCTTGGAG TCTCCACCAT CATTCCCATG CTCACGGCGC GGACGCTCTC CCATCCATCA AATGAAAAAG TGCAGGGCAA GCTTAACCGC TGGAGAACCA TCATGCTTTC AGCAGCCCGG CAATCAAAAC GCCATTATCT GCCACAGCTC ACTGAGCCGC TCACCTTTAA AAAAGCTGCG GCGCTTCAGG GTTATGATCT CAAGCTTATT CCCTATGAAC TTTCAGAGGC CCCTCCAAAG GTGAAATGCA GCGGCAAAAA AATCCTCTTT CTCATTGGTG GTGAAGGCGG ATTCACTGCC AATGAAATCG AGGAGGCCCG TGCCGCTGGT TTCAATGAAC TCTCTTTTGG AAAAACAATT CTCAGGGCCG AAACCGCCGG AATTTTTGCA GTCGCATTGG TTCGCACACA GCTCCTTGAA GAGGAGCGCA TCGAGTGGTT TTAA
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Protein sequence | MELFYTSTQH IDLDARNLVV DGDEFHHLVR VLRKKTGEKI LVTDGNGLRC EASIAEIGKT SFTADILACS RIDRPNTEVT VALSLLKAPQ RFELFLEKAT ELGVSTIIPM LTARTLSHPS NEKVQGKLNR WRTIMLSAAR QSKRHYLPQL TEPLTFKKAA ALQGYDLKLI PYELSEAPPK VKCSGKKILF LIGGEGGFTA NEIEEARAAG FNELSFGKTI LRAETAGIFA VALVRTQLLE EERIEWF
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