| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0332 |
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| Symbol | |
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| ID | 6460938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 317372 |
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| End bp | 318496 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726624 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_002017282 |
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| Protein GI | 194335488 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.187228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTC TTTATCTCCA TATTCCATTT TGCAAAGCAC GCTGCTCTTA TTGTGACTTT
TATCTGGTTA CGGGCAGAGG GCATATCAGC GACTTTTTCC GTGCACTCTC TCTTGAAACA
GCATCCCGGT TAACAGATCT GAAAGGAGAG ACGGTTGGCG CCATTCATTT TGGAGGAGGC
ACTCCCTCAA TGGTTCCCGT GAGCTATCTT GCCGCATGGC TTGAAGAGGT TGCTGCCTTG
TGCAGTTTTT CTCCTGAAAT CGAAATAACC CTTGAAGCCA ATCCTGAAGA TCTTGATAAA
AAGAAGATGG AGGAGCTTCG GGCAGCGGGG ATAACAAGGC TCAGCATCGG CGTTCAATCC
TTTACAGCCG AAAAGCTGCA GGCTCTTGGT CGGGCGCATA CGGCATTGCA GTCCCGACAG
GTAACAGCAG CCGCACTTCG TCTGTTTGAG TCGGTCAGTG TTGACCTTAT TTGCGGGGTA
CCCGGAGAGA ATACTGTGAT GTGGAAGAGC GATCTGCATG AGGCTCTGGC ACTGCGCCCG
CACCATGTGT CGGTCTATAT GCTCTCGGTT GAACCGAAGA CCATCCTCCA TCACAGGGTA
GCAAAAGGGA GTGTTACCGT ACCGGATGAT GCCGTGCAGG CAGCATGTTA TGAGCATGCC
CAAAGTGAAC TGCAGCTTCA GGGCTACAGC CATTACGAAG TATCCAATTT CTGCTTGCCC
GGACATCATT CCCGCTATAA CCTTGCGAGC TGGAAGCGTG AGCCATACCT TGGCTTTGGC
CCCTCTGCAC ACAGTTTTTC TGTTTCTCAG GAGCGTGAGA TTCGTACGGC AAACGTCTCA
AGCCTTACAC GATATCTTGC AGCTCCTGCA GACGCAGTTG TTTTTCGTGA AGAGCTTTCG
GCTGAAGAAC GCTTTACGGA ACAGGTTTTT CTTTCACTTC GAATAAACAG TGGTCTGGAT
GTTGATTTTT TGCGAAAAGG AAATAAATTA GAGCACACTC TTTCACAGAC CATTGCCCGA
TTTTCAGAAA AGGGATGGAT AGAGCAGCAG GAAGGATCTC TATATTTGAC TCAGAAAGGT
TTTTTGTTTG TCGATCTCAT TGCCGGGGAG TTTCTTTTCG GGTAA
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| Protein sequence | MLTLYLHIPF CKARCSYCDF YLVTGRGHIS DFFRALSLET ASRLTDLKGE TVGAIHFGGG
TPSMVPVSYL AAWLEEVAAL CSFSPEIEIT LEANPEDLDK KKMEELRAAG ITRLSIGVQS
FTAEKLQALG RAHTALQSRQ VTAAALRLFE SVSVDLICGV PGENTVMWKS DLHEALALRP
HHVSVYMLSV EPKTILHHRV AKGSVTVPDD AVQAACYEHA QSELQLQGYS HYEVSNFCLP
GHHSRYNLAS WKREPYLGFG PSAHSFSVSQ EREIRTANVS SLTRYLAAPA DAVVFREELS
AEERFTEQVF LSLRINSGLD VDFLRKGNKL EHTLSQTIAR FSEKGWIEQQ EGSLYLTQKG
FLFVDLIAGE FLFG
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