| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0320 |
|---|
| Symbol | cysS |
|---|
| ID | 6460915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 304974 |
|---|
| End bp | 306428 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642726612 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_002017270 |
|---|
| Protein GI | 194335476 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCT TCATTTATAA TTCCCTCGGC AGAACAAAAG AGAAATTCGA ACCCCTGCAT
CCACCGATTG TTACCATGTA TGTGTGCGGA CCGACTGTTT ATGGTCATGC CCATCTCGGT
CATGCAAAAA GCTATGTCTC ATTTGACGTG GTCGTTCGTT GGCTGCGCCA TAGCGGCTAC
CGGGTAAAAT ATGTGCAGAA CATTACTGAT GTGGGCCACC TGACCGATGA TGCCGATGAG
GGTGAAGACA AAATATCGAA GCAGGCCCTT CTCGAAAAAA CAGATCCCAT GGAGATTTCG
CAGTTCTATA CACGAAGTTT CTATGAGGAT ATGGACAAAC TGGAGGTGCT CCGTCCCAAT
ATCGCTCCTG CGGCTACAGC TCACATTCCT GAGCAGATTG AACTGATTGA GCGACTCATC
GATGCCGGTC ACGCCTATGA GGTGCATGGC AACGTCTATT TCTCGGTGGA GTCGTTTCCG
GGATATGGAA AACTCTCGGG ACGAACGGAC CAGGAGGCGG TGCAATCGGG TATCAGGGTG
GGAGTACGCT CTGAAAAGCA GCACCCTTCC GACTTTGCGC TCTGGAAAAA GGCTGAAGAG
GGGCATCTGA TGAAATGGAA CTCTCCATGG AGTATCGGCT ATCCGGGCTG GCATCTGGAA
TGTTCTGCAA TGTCGATGAA ATATCTTGGC GAGACAATCG ATATTCATGG CGGGGGGATG
GAGAACAAGT TTCCTCACCA TGACTGTGAA ATTGCCCAGT CAGAATCGGT CACCGGGAAA
CCCTATGTGA GGTTCTGGAT GCACAATAAC ATGGTGACGG TCAATGGGAT AAAAATGGGG
AAGTCCCTGA AAAACTTCAT CAATCTCAAA GATCTCTTCT TGAGCTTCGA TCCGATGGTC
ATCAGATTCT TTATCCTGCA GTCGCATTAT CGCTCTCCGC TTGACTTTTC GGACGCAGCG
ATACGCGCTT CACAGACCGG TCTTGAAAAA CTCCGTGAGA CCCAAAGACG ACTCCGGGAA
CAGACTCCGG GTAGCGGTGA CTTTGATACG GCCCCATTTA TTCAACGCTT TACCGAGGCG
ATGGATGATG ATTTCAACAC CCCCATTGCG ATTTCTGTTC TTTTCGACCT CTCAAAATCA
ATCAACGCGG CTCTTGATCG TACCGAAAGT ATCTCGGAAC TTCCTCAGCA AGAAGCTGCA
GCTTTTCTTG ACCTGGCCGG AAGGGAAATT CTCTGCATTC TTCAGCACGA TAACCAATCC
GGTAGTAGAA ATGAGGAACT GAATGGCAAA AGACTTGATG GCGTAATGGA TATCCTGCTT
GACCTGCGGG CTGAAGCCAG AAAGAGCAAG GATTTCGCCC TCAGCGACAA AATCCGCGAC
CAGCTCCTTG TTGCCGGAAT TGAAATCAAG GATACCAAAG AGGGTGCCAG TTGGTCGAAG
AGAGCCAGCG TTTAA
|
|---|
| Protein sequence | MSLFIYNSLG RTKEKFEPLH PPIVTMYVCG PTVYGHAHLG HAKSYVSFDV VVRWLRHSGY
RVKYVQNITD VGHLTDDADE GEDKISKQAL LEKTDPMEIS QFYTRSFYED MDKLEVLRPN
IAPAATAHIP EQIELIERLI DAGHAYEVHG NVYFSVESFP GYGKLSGRTD QEAVQSGIRV
GVRSEKQHPS DFALWKKAEE GHLMKWNSPW SIGYPGWHLE CSAMSMKYLG ETIDIHGGGM
ENKFPHHDCE IAQSESVTGK PYVRFWMHNN MVTVNGIKMG KSLKNFINLK DLFLSFDPMV
IRFFILQSHY RSPLDFSDAA IRASQTGLEK LRETQRRLRE QTPGSGDFDT APFIQRFTEA
MDDDFNTPIA ISVLFDLSKS INAALDRTES ISELPQQEAA AFLDLAGREI LCILQHDNQS
GSRNEELNGK RLDGVMDILL DLRAEARKSK DFALSDKIRD QLLVAGIEIK DTKEGASWSK
RASV
|
|---|
| |