| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0309 |
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| Symbol | secY |
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| ID | 6462216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 297304 |
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| End bp | 298635 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726601 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_002017259 |
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| Protein GI | 194335465 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0197098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTA ATGAAAGTAT AAGGAACATC AATAAAATCC CTGAACTCCG TCAGCGGATC
CTTTATACGC TTCTTCTTTT ATTTGTCTAC AGGCTGGGTT CACATATTAC CATTCCGGGT
GTTGATGCGG CTGCTGTGTC AGGCGCATCG CAGACCCACT CCAACGATCT CTTCGGACTA
TTTGACCTTT TTGTCGGCGG TGCTTTTGCC AGAGCTTCGA TCTTTTCTCT TGGTATCATG
CCCTATATCT CAGCATCGAT CATCGTGCAG TTGCTTGGGG CGGTTACTCC ATATTTCCAG
AAACTCCAGA AAGAGGGGGA AGATGGCCGG CAGAAAATCA GTCAGATGAC ACGATATGGA
ACAGTTCTTA TTGCGGTACT CCAAGCTTGG GGAGTGAGTG TAAGCCTCGC CAGTCCAGCC
TCCTTCGGCA CTGCCATTGT TCCCGATCCA GGGATCTTTT TTACCATCAC CGTAGTGGTT
CTCCTGACAG CTTCGACGGT CTTTGTCATG TGGCTCGGAG AAAAAATTAC TGAACGGGGT
ATTGGTAATG GCATATCACT CATTATCATG ATCGGTATCC TTGCAAGGTT TCCTCAGGCT
CTTGTGGCCG AGTTTCGTTC TGTCTCGCTG GGAAGCAAGA ACTGGGTAAT TGAGATTATC
ATTCTTGCCA TGATGGCGGC GATTGTTGCT TTTGTGGTTA TCCTGACGGT TGGTACCCGC
CGTGTTCCTG TCCAGCATGC CAAAAGGGTT GTTGGGCGCA AGGTCTACGG AGGCAGTACC
CAGTATATTC CAATGCGGAT CAATACCGCC GGTGTCATGC CGATTATCTT TGCACAATCG
ATCATGTTTC TTCCTGGCAC CTTCCTCTCT TTTTTCCCTG AAAATGAGGT GATGCAGAGC
ATTGCCAAGT TACTCGCTTA TGACTCCTGG TGGTATGCAC TCATGTTCGG CACCATGATT
GTCTTCTTTA CCTATTTTTA TACAGCAATT GCCTTCAATC CAAAGGAAGT TGCCGACACC
ATGCGCCGTC AGGGAGGCTT TATTCCGGGT GTTCGACCTG GCAAGAGCAC GGCAGATTTT
ATAGATAATA TTTTGACTCG TATTACACTG CCTGGTGCCA TATCGCTTGC CATCATCGCA
ATCCTGCCAA CATTTTTGAC TAAATTCGCC AATGTAACAC CAGGGTTTGC CCAGTTTTTT
GGTGGAACAA GTCTTCTGAT TATTGTTGGA GTCGGCCTTG ATACCTTGCA GCAGGTTGAA
AGTCATCTGC TCATGCGGCA CTACGATGGT TTTATGAAGT CAGGCAAAAC ACGCGGACGA
CAGAGCAGGT AA
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| Protein sequence | MKLNESIRNI NKIPELRQRI LYTLLLLFVY RLGSHITIPG VDAAAVSGAS QTHSNDLFGL
FDLFVGGAFA RASIFSLGIM PYISASIIVQ LLGAVTPYFQ KLQKEGEDGR QKISQMTRYG
TVLIAVLQAW GVSVSLASPA SFGTAIVPDP GIFFTITVVV LLTASTVFVM WLGEKITERG
IGNGISLIIM IGILARFPQA LVAEFRSVSL GSKNWVIEII ILAMMAAIVA FVVILTVGTR
RVPVQHAKRV VGRKVYGGST QYIPMRINTA GVMPIIFAQS IMFLPGTFLS FFPENEVMQS
IAKLLAYDSW WYALMFGTMI VFFTYFYTAI AFNPKEVADT MRRQGGFIPG VRPGKSTADF
IDNILTRITL PGAISLAIIA ILPTFLTKFA NVTPGFAQFF GGTSLLIIVG VGLDTLQQVE
SHLLMRHYDG FMKSGKTRGR QSR
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