Gene Ppha_0308 details

Gene Information

• Locus tag: Ppha_0308
• Symbol: rplO
• ID: 6461540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 296731
• End bp: 297285
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642726600
• Product: 50S ribosomal protein L15
• Protein accession: YP_002017258
• Protein GI: 194335464
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0135677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTAA GTTCACTTCG TCCTGCAAAA GGCGCAGTAA AAAACAAAAA GAGGGTCGGT 
CGCGGTCAAG GTTCAGGTAA CGGAACGACC GCTGGCAAGG GAAATAATGG TCAGCAGTCA 
CGTAGCGGCT ACAAAAGACC TATTATTGAA GGCGGCCAAG TACCTGTTTA CCGGAGATTG 
CCAAAATTCG GTTTTACTCC TCTTGATAAG AAGCCGGTAA ATACGGTCAA TCTTACCCAG 
ATCGATAAAT GGATTCAGGA TGGTCTTGTA GAAAACGAGA TTACCATTCT TGATCTCAAA 
TCGCTTCTGC ATGCGAGTAA TGCTGATTAT TTCAAGATTC TCGGCAATGG TGAACTGACA 
AGCGCTATCA CCATTACCGC TCATGCTTTC AGCAAAAGTG CCGAGGAGAA AATAGCCGCA 
GCAGGCGGAA CAGTAGTGAA AGCCTTCCGT ACGCTGGAAG AGGCATCCAA GGTCAGGGAT 
CTGCCGTTTG AAGAGGCTCT CCTGAAACCA AAGGCAAAGC TCGTAAAGAG AGCAAAAAAA 
TCCACCAAGC CTTGA 

 

Protein sequence

MDLSSLRPAK GAVKNKKRVG RGQGSGNGTT AGKGNNGQQS RSGYKRPIIE GGQVPVYRRL 
PKFGFTPLDK KPVNTVNLTQ IDKWIQDGLV ENEITILDLK SLLHASNADY FKILGNGELT 
SAITITAHAF SKSAEEKIAA AGGTVVKAFR TLEEASKVRD LPFEEALLKP KAKLVKRAKK 
STKP