| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0307 |
|---|
| Symbol | rpmD |
|---|
| ID | 6462561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 296496 |
|---|
| End bp | 296696 |
|---|
| Gene Length | 201 bp |
|---|
| Protein Length | 66 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642726599 |
|---|
| Product | 50S ribosomal protein L30 |
|---|
| Protein accession | YP_002017257 |
|---|
| Protein GI | 194335463 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0473987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATG CGATCATGAG TGAGAAAATA TTAAGGATTA CCCAGGTGCG CAGCATTATT
GGTGGCACAA AAAAGCAGAG AGCCACCATT CAGGCGCTTG GCCTCGGCAG GCCAAATTAT
CATGTTGACC GTCAGGACAA TCCCTGCACC AGGGGGCAGA TAAGGGTTGT GCAGCACCTT
GTAAAGGTTG AAGAGGTCTA A
|
|---|
| Protein sequence | MTNAIMSEKI LRITQVRSII GGTKKQRATI QALGLGRPNY HVDRQDNPCT RGQIRVVQHL
VKVEEV
|
|---|
| |