| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0303 |
|---|
| Symbol | rpsH |
|---|
| ID | 6461449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 294571 |
|---|
| End bp | 294966 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642726595 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_002017253 |
|---|
| Protein GI | 194335459 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.20005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTAA CGGATTCTAT TGCAGATTAT ATCACCCGTA TCAGAAATGC GGGAAGAGCA
AAAAATAAAA CAACCGATAT CCCGTATTCA AAGCTCAGGG AGAATCTTTC GCAATTGCTT
GTGGAGAAAG GGTACATTAA AAACTTTACG GTCATAACCA CCGAAAAATT TCCGTTTCTT
CGGATTGATC TGAAGTATAC TGCCCATGGT GATCCTGCTA TCAAGGAGAT CAGCAGAGTC
AGCAAGCCGG GTCGGCGTGT TTATGATGGA AAAGATATTA AAAAATATCT TGGTGGTCTC
GGGTTGTATA TCCTCTCATC ATCGAAAGGG GTAATAACCG ATAAAGAGGC AAGGGCACAG
GGCGTAGGTG GTGAAATCCT GTTCCGTATC TATTAA
|
|---|
| Protein sequence | MPVTDSIADY ITRIRNAGRA KNKTTDIPYS KLRENLSQLL VEKGYIKNFT VITTEKFPFL
RIDLKYTAHG DPAIKEISRV SKPGRRVYDG KDIKKYLGGL GLYILSSSKG VITDKEARAQ
GVGGEILFRI Y
|
|---|
| |