| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0290 |
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| Symbol | rplD |
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| ID | 6462038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 288426 |
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| End bp | 289064 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642726581 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_002017240 |
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| Protein GI | 194335446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGAAG CTATGGAACT TAAAGTCTTA AATACCGGCG GTACTGAAAC CGGGGAAGTG
GTAACGCTCC GTGACGATAT ATTCGGCGCT GAAATATCTG AACATGCGAT GTACCTCGAC
GTCAAGTCGA TTCTCGCAAA CAGACGGCAG GGAACGCACA AGTCAAAAAC ACGTGGAGAG
GTAAGAGGTG GTGGCAGAAA GCCGCTTCGC CAGAAAGGAA CCGGTAATGC TCGTCAGGGT
TCAAGCCGTT CGCCACTCAA TATCGGTGGT GGTACCATAT TCGGTCCTGT CCCCCATGCA
TACGATCAGA AGGTCAACAA GAAGGTTAAG CTTCTTGCAA GACGCTCTGC TCTGAGTTCG
AAGGCGAAGG CCGGTCAGAT TGTTGTTATT GAGGATTTTG TCTTTGAGAA CATCAAGACG
AAACCTTTTG CCCAGATTCT GAAAAATCTT GGTCTCGCTG AGAAAAAAAC TCTTATGTTG
ACGCCCGGGT ATGATCTGAT CATTGCAAGA TCCGGAAAGA ATATCGCGGC ACTGAATATC
ATGACAGCCG ACAAGGCATC GACCTATGAT ATTCTTCACA GCCATACGCT ACTCGTTCAG
AAGACAGCGC TGAAAAAAAT AGAAGATACT TTAGGGTAA
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| Protein sequence | MHEAMELKVL NTGGTETGEV VTLRDDIFGA EISEHAMYLD VKSILANRRQ GTHKSKTRGE
VRGGGRKPLR QKGTGNARQG SSRSPLNIGG GTIFGPVPHA YDQKVNKKVK LLARRSALSS
KAKAGQIVVI EDFVFENIKT KPFAQILKNL GLAEKKTLML TPGYDLIIAR SGKNIAALNI
MTADKASTYD ILHSHTLLVQ KTALKKIEDT LG
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