| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0288 |
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| Symbol | rpsJ |
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| ID | 6461084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 287456 |
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| End bp | 287767 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642726579 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002017238 |
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| Protein GI | 194335444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.42125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGTAC AGCAAAAGAT AAGAATCAAG CTCAAGTCTT ACGACCATAG CCTGGTTGAT
AAGTGGGCTC TAAGGATTAT TGATGTGGTC AAGCAGACGG ATGCTATTAT CTTTGGTCCA
ATACCGCTGC CTACAAAATC GCATGTTTAC ACCGTAAACC GGTCTCCGCA TGTCGACAAG
AAGTCCCGTG AGCAGTTTTC ATTCTCCTCT CACAAGAGGT TGATTGAAAT TATAAACCCG
ACATCCAGAA CCATTGATAT GCTGATGAAG CTCGAACTTC CAAGCGGCGT TGATGTTGAA
ATTAAGTCTT AA
|
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| Protein sequence | MAVQQKIRIK LKSYDHSLVD KWALRIIDVV KQTDAIIFGP IPLPTKSHVY TVNRSPHVDK
KSREQFSFSS HKRLIEIINP TSRTIDMLMK LELPSGVDVE IKS
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