| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0281 |
|---|
| Symbol | |
|---|
| ID | 6461946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 281508 |
|---|
| End bp | 281771 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642726573 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002017232 |
|---|
| Protein GI | 194335438 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00676496 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACG TTCTGGTCTT TAAGGACTAT ACAGGATCGG TACACTTCAA TGCAGATGAT
GAGGTGTTTT TTGGCAAGAT CGAGGGAATT GAAGATCTTA TGTCATTTGA AGGCGATAGT
ATCATTGAAC TGAAAACAGG ATTTGAAGAG GCTGTAAACG ATTATCTTGA AATATGTAAA
AACAACGGCG AGAAAAATAA AATGGGAGAC TTGATGTCCG AATTGCGCCA GACATCCACC
AAAAAGCACC AAGGCTTGCT TTGA
|
|---|
| Protein sequence | MKDVLVFKDY TGSVHFNADD EVFFGKIEGI EDLMSFEGDS IIELKTGFEE AVNDYLEICK
NNGEKNKMGD LMSELRQTST KKHQGLL
|
|---|
| |