| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0278 |
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| Symbol | |
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| ID | 6462456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 277865 |
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| End bp | 280612 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726570 |
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| Product | helicase domain protein |
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| Protein accession | YP_002017229 |
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| Protein GI | 194335435 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGATA TCCGAAGATT TTCTTCATTG CGTGAACGGC TTGATCACGT TTTCCTTGCC
GAAAAACTTC ACAATGCACG CTCCTACAAA CGGATTGCCG GATACTTTCG CTCATCCATC
TTTGAGCTGG TTGGTGAGGA GATTGAACAT ATCCCTGATG TTCGCATTAT CTGTAACAGC
GAACTTGACC CCAATGATAT CATGGTCTCC AAGGCAGCAC GGGAAGCGGC GCTGAAAGAG
CGGTGGAATC AGATGCCGGT GGAAACAGAG GCGTTGATGC ACCGGGAGCA GTACAAAAAG
CTCTACGAAC TGCTTTTGTC GGGGCGGGTG CACATCAAGG TTGTTCCGAA AAACACCGTT
TTTGTTCATG GCAAGGCTGG GCTCATTACA CTGGCAAACG GGCAGCGAAC CTGCTTTCTC
GGGTCGGTCA ACGATAGCCG GGCAGCCTTC TCAAAGAACC ATGAAATTTT ATGGGAAGAC
CAGTCGGCGG AAGGGTGCGA CTGGGTGGAG CAGGAGTTCG ATGCACTGTG GAAACTGGGT
CACGATCTGC CGGATGCCAT AATCACCGAG GTAAAGCGCA TCAGTGAGCG AGTTGAGGTG
AGTTTTGCCG ATCTGAAGCC GGAGGAGATA CCAGCGGCGG CCATGATTGA ATCGCCGATC
TACCGTGGCG GTGAGCAATT GCAGCCCTGG CAGCGCTCCT TTGTCACAAG CTTTCTCCAA
CACCGTAACG TGTTTGGAAA AATAAGGCTG CTTCTTGCTG ACGAGGTTGG ATTGGGCAAA
ACCCTCTCAA TGGCTACTGC CGCTCTTGTT GCCGCCCTGC TTGGTGATGG CCCGGTCCTT
GTTCTTTGCC CTGCGACGCT TACCCTGCAA TGGCAGACAG AGATCAATGA CTGGCTGGGC
ATTCCAAGTG CGGTCTGGGT CTCCAACGCC AAACACTGGT TAACACCGGA TGGACGGCCC
GTCCCTTCAC GAGGTGCAGA AGATATTGCC CACGCCCCTT ATCAAATTGC CATTGTTTCA
ACAGGGCTGA TTGTGCATGA CTCCGAGGAG GCTGGTATTT TAAGGAATCT CAGATTTGGG
ACGTTGATAC TGGATGAAGC TCACAAGGCG CGTGTCAGAG GCGGGCTGAA GCAAGAGCAG
GAACCAAATA ATCTGCTGGC GTTCATGCGG GAAGTTGTGA AGAACTCGAA GCATGTTCTG
CTTGGAACGG CAACACCGAT TCAGACCGAC GTTCGTGAGC TATGGGATCT TGTTGCTCTT
CTCAATCAGG GGGCGGAATT TGTGATGGGA CGCGATTATG TCTCCTCATG GCGAGACTGG
GAAAAAACAG TGCCACTGGT GACCGGCGAA GAGGTTGTTT CAGATGAAAT GACGGCATGG
AACCTTCTTC GCGCACCGCT TCCGGCAAGA GAAACACCCA TGATGGATCA GAGTGCAGCC
CGTCTGGTCA GAATGATTCG CACCGATCTT GGTATTCCGG ATTCCAAATT CTTTACCGAT
GCAGCCCCGG AATCGTTAGC TCTCATGACC CGAAAAATGG ATCTGCAGTC AATTCTTGGT
ACTGATTTTT TTCATCGCAA TAATCCATTC ATTCGGCATG TGGTGATAAG AAGACGTGAA
GCACTTGAAA ATGCGGGTCT CCTCGATAAA ATTGCGGTCA GTGTTCACCC GATTCCTGAT
GCCCGGCCCG GCACCTATAC TGGAGCGGTA TTTCAGGGCA TTGGCCTCAT GACCAACCAC
CCGTTCGAGC TTGCCTATCA GGCTGCGGAA AGCTTTGTCT CGGAACTCAG TAAGCGGACA
AAAGGGGCTC AACTGTTGCG GTCAATCTTT TTGCAGCGAA TATGTTCATC CTTTGAGTCT
GGCAAACTGA CCGTGACGAG GATGCTCAAG AAGCAGCTCA ATGAACACGA CGATGACGAC
ATACAAAAAG TCGAGCGCAG TGTCCTTGAA ACATTGACAG AAGCTGAAAT TTCATATCTG
CACATCATCC TTGAAGAGTT ATCCCGAAGT GAGGCGGTTG ATCCCAAGCT TAGGGCGGTG
AAATGGTTTC TGCAACATTT TCAAAGCGAA GGGAAGAGCT GGAACGAGTG GGGCTGCATC
GTCTTTTCCC AATATTATGA TACCGTCAAT TGGGTTGCCC TGGAACTTGC GAAACTTTTC
CCTGAGCAGA TTGTTGCCGT CTATGCAGGC GCGGGGAAAA GCGGGCTCTA TCGAGGGGAT
CAATTTGTCT CAATCAATCG CGACAGTATT AAAAAAATGG TCAAAGAGCG GGAAGTTTCT
TTGGTTGTCG CTACCGATGC CGCGTGTGAA GGACTCAACT TGCAGACACT TGGAACCCTT
ATCAATATTG ATCTCCCCTG GAACCCAGCC AGACTTGAAC AGCGATTGGG GCGGATCAAG
CGATTTGGTC AGGCTCGCAA AAGCGTGGAT ATGCTCAACC TCACCTATCA TGCCACACGT
GATGAAGATG TCTACGCAAA AATATCTGAA CGGATGAAAG AGCGCTACGA TATTTTCGGG
GGATTACCTG ATTGTATTGA GGATGACTGG ATAGACAACA TTGAGGGATT TGTCAAGCTT
GCAGACACTC ACCTCCATAT GCGCAAACAG GTCGCGAATA TCTTTGAGAC CACTTGGGGT
AGTACCATCA AGAGCGAAGA TGACCGCTGG GAGGAGTGTG CCCGTGTGCT GTCGCAAAAG
GATATCAACG CCGTTATGAG CAAGCCCTGG GGGAAGAGGG GATGGTAA
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| Protein sequence | MGDIRRFSSL RERLDHVFLA EKLHNARSYK RIAGYFRSSI FELVGEEIEH IPDVRIICNS
ELDPNDIMVS KAAREAALKE RWNQMPVETE ALMHREQYKK LYELLLSGRV HIKVVPKNTV
FVHGKAGLIT LANGQRTCFL GSVNDSRAAF SKNHEILWED QSAEGCDWVE QEFDALWKLG
HDLPDAIITE VKRISERVEV SFADLKPEEI PAAAMIESPI YRGGEQLQPW QRSFVTSFLQ
HRNVFGKIRL LLADEVGLGK TLSMATAALV AALLGDGPVL VLCPATLTLQ WQTEINDWLG
IPSAVWVSNA KHWLTPDGRP VPSRGAEDIA HAPYQIAIVS TGLIVHDSEE AGILRNLRFG
TLILDEAHKA RVRGGLKQEQ EPNNLLAFMR EVVKNSKHVL LGTATPIQTD VRELWDLVAL
LNQGAEFVMG RDYVSSWRDW EKTVPLVTGE EVVSDEMTAW NLLRAPLPAR ETPMMDQSAA
RLVRMIRTDL GIPDSKFFTD AAPESLALMT RKMDLQSILG TDFFHRNNPF IRHVVIRRRE
ALENAGLLDK IAVSVHPIPD ARPGTYTGAV FQGIGLMTNH PFELAYQAAE SFVSELSKRT
KGAQLLRSIF LQRICSSFES GKLTVTRMLK KQLNEHDDDD IQKVERSVLE TLTEAEISYL
HIILEELSRS EAVDPKLRAV KWFLQHFQSE GKSWNEWGCI VFSQYYDTVN WVALELAKLF
PEQIVAVYAG AGKSGLYRGD QFVSINRDSI KKMVKEREVS LVVATDAACE GLNLQTLGTL
INIDLPWNPA RLEQRLGRIK RFGQARKSVD MLNLTYHATR DEDVYAKISE RMKERYDIFG
GLPDCIEDDW IDNIEGFVKL ADTHLHMRKQ VANIFETTWG STIKSEDDRW EECARVLSQK
DINAVMSKPW GKRGW
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