| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0254 |
|---|
| Symbol | |
|---|
| ID | 6463530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 248225 |
|---|
| End bp | 248491 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642726548 |
|---|
| Product | Phosphotransferase system, phosphocarrier protein HPr |
|---|
| Protein accession | YP_002017207 |
|---|
| Protein GI | 194335413 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTGTTC AGGAAGTTAT CGTTAAAAAC AAGGCAGGGC TGCATACCAG ACCTGCGGCT
GCGGTTGTCA AACTCGCATC CCGTTTCAAA TCAGATTTTT TTATTGAGAT GCAGGGTGTT
GAAATTAATG CGAAGTCCAT TATTGGTGTC ATGAGTCTTG CGGCTCCGAA GGGTACCCGG
TTGACGCTTA AGCTGGATGG CGAGGATGCT GCTGAGGCTT CCCGTCAGTT GGTTGAGTTT
TTTGAGCAGG GTTTTGGAGA GGTATAG
|
|---|
| Protein sequence | MIVQEVIVKN KAGLHTRPAA AVVKLASRFK SDFFIEMQGV EINAKSIIGV MSLAAPKGTR
LTLKLDGEDA AEASRQLVEF FEQGFGEV
|
|---|
| |