| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0250 |
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| Symbol | gatB |
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| ID | 6462468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 244949 |
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| End bp | 246376 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726544 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_002017203 |
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| Protein GI | 194335409 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0127407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATG AATTAGTGGT GGGCCTTGAG GTGCATTGTC AGCTCAATAC CACAAGCAAA
GCCTTCTGTG GCTGTTCGGC GAAGTTCGGC AAGTCGGCCA ATACCAATGT ATGTCCTGTC
TGTCTCGCTC TTCCCGGAGC GCTGCCGGTT CTTAACCGTC GTGTTGTTGA AGATGCCGTG
AAGCTTGGTC TTGCAACGGG TTGCTCTATA GCGCCCCACT CAGTGCTTGC CCGGAAAAAC
TATTTTTACC CTGATTTGCC GAAAGGGTAC CAGATTTCGC AGTTTGAAGA ACCGATATGC
AGCGAAGGGA TGGTGCACAT TGATGCCGGA GAGGGTAATC GGGAGATTCG ACTGATCAGG
ATTCATATTG AGGAGGACGC CGGAAAATCA ATTCATGATA TCGGTGAGGA GACCTATATC
GATCTCAACC GGAGTGGTGT CCCTTTGCTT GAAATTGTAA GTTATCCTGA CCTGCGCACT
TCGAAAGAGG CGTCAGCTTA TCTGCAGAAG GTACGCCAGA TCGTCAAATA TCTTGGTATC
TCGGATGGCA ACATGGAGGA GGGAAGTCTT CGCTGTGATG CAAACGTCTC TTTGCGGCCA
GTCGGGGAGA CGGAGTATGG TACCCGTACT GAGATCAAGA ATATGAACTC TTTCAAGAAT
GTTGAAAAGG CAATCGATTA CGAGGTCGAG CGTCATCGTG AGATTCTTGA AGCCGGTGGG
GTTATTCTGC AGGAGACCCG TCTCTGGGAT GCCGACAAGG GGGAGACCCG TTCCATGCGC
GGCAAGGAGT TTGCCCATGA TTATCGTTAC TTCCCTGATC CTGATCTGGT GCCGGTGCTG
GTTGATCAGG AGATGATTGA TCGGATCATG AGTGAGCTTC CCGAGTTTCC GGAAGAGAGG
GCTGTCCGGT TTGTTGATGA GTATGCCATT CCGGCCTATG ATGCAGCCGT GCTGACTGTC
GAGCGCGAGG TTGCGGACTA TTTCGAGGAG AGCGTCAGGG TTTCTGGCGA TGCCAAGGCT
TCGTCCAACT GGGTGATGGG TGAGGTGATG CGCGTGCTGA AAGAGAGTTA TCTGGATATT
GCGGAGTTCT CCATTCTTCC GGAACGGCTT GGAGGGTTGA TTGCGCTGAT TGGAAAGGGT
GTGATCAGTA CTACCATCGC CAAGCAGGTT TTTGAGCTGA TGCTGAAGAG TGGCGATGCT
CCAGCGGAAA TTGTTGAACG GGAGGGACTT GCACAGGTTT CTGACAGTGG CGCGATTGAG
ACGGTTGTGC AGGCAATTCT TGATGCCAAC CCCGGTCAGT TGGCCGCCTA TCGCGGCGGA
AAAACCAAGC TCCTTGGCTT TTTTGTTGGT CAGTGCATGA GCCAGATGAA GGGCAAGGCC
AATCCCCAGA TGGTTAATGA GGTGCTGTTA AGGAAGCTCG AGGGGTGA
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| Protein sequence | MKYELVVGLE VHCQLNTTSK AFCGCSAKFG KSANTNVCPV CLALPGALPV LNRRVVEDAV
KLGLATGCSI APHSVLARKN YFYPDLPKGY QISQFEEPIC SEGMVHIDAG EGNREIRLIR
IHIEEDAGKS IHDIGEETYI DLNRSGVPLL EIVSYPDLRT SKEASAYLQK VRQIVKYLGI
SDGNMEEGSL RCDANVSLRP VGETEYGTRT EIKNMNSFKN VEKAIDYEVE RHREILEAGG
VILQETRLWD ADKGETRSMR GKEFAHDYRY FPDPDLVPVL VDQEMIDRIM SELPEFPEER
AVRFVDEYAI PAYDAAVLTV EREVADYFEE SVRVSGDAKA SSNWVMGEVM RVLKESYLDI
AEFSILPERL GGLIALIGKG VISTTIAKQV FELMLKSGDA PAEIVEREGL AQVSDSGAIE
TVVQAILDAN PGQLAAYRGG KTKLLGFFVG QCMSQMKGKA NPQMVNEVLL RKLEG
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