| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0248 |
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| Symbol | |
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| ID | 6461996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 241819 |
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| End bp | 244200 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642726542 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002017201 |
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| Protein GI | 194335407 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.57059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAC GTTTTGTGAA ATACAACCCT GCTTTTCTTG AAAGTGATGA GCTGATAGAA
AATTTTGTTG TCCGGCAGAT CGACTTTCGG ATGATTACCA GAATCATTCG GGAGAATACC
ATGGCATCAA ATCAGCATAT GCTGGTTATT GGGCCACGAG GAAGCGGAAA GACCACTCTG
GTTCGTCGGA TTGCCCTTGA AGTAGAGCGT GATGAGGAAC TGGAGAGTGC GTGTTATCCA
CTTATATTTG CTGAAGAAAG CTACAATGCT GTTTCCGCTG CTGACTTCTG GCTTGAGGCG
CTTTTTCATC TGGCTGAGCA TACAGGAGAT GCACAAATGA TGCGTACCTA TCAAGAACTC
CGTCGTGACC CTGATGAACA GCGTCTTGGA GAGAGAGCGC TTGGGCAGTT ACTTGATTTT
GCCGATAAGA TCGGCAAGCG CCTTCTTCTT GTGGTAGAAA ATCTTGACAT GCTGCTTTCA
GAGTTTTCAG ATAAACAGGA AGCATGGAAA CTTCGTCATA CATTGATGAA CGAACCGCGT
TTGATGCTGC TTGCAACAGC AACAGGAAGA TTTGAGGAAA TCGATCATCC GGCGCACGCC
ATGTTTGAAT TGTTCAAAAT TCATGAACTC AAGGCGCTTG ACGATCAGGA ATGCAATACC
GTTTGGGAAC TCATAGCCGG AGAGAAGCTT CCGGGAGAGC AGATCAGGCC GGTAAGGATT
CTGACAGGGG GAAATGCCCG TCTGATAGCC CTCATTGCGA GGTTTGGGGC CAAACGCTCA
TTCCAGCAAC TCCTTGATGA TCTCATAGAT TTGATAGATG AGCATACCGA TTATTTCAAA
AGCCATCTCG ACGCTATGGC TTCCAAAGAG CGCAAAGTCT ATCTCGCTCT TGCTGAATTA
TGGAGTCTTT CAACAGCAAA AGAGGTAGCC GAAGTGGCAC GGCTTGACGT CAATACTGCC
AGTGCGCTTC TTAACAGGCT GGTCAGTCGT AGTAAAGTTT TATTTGAGGA GAAAGGTAAA
AGAACAAAAT GGTACAGGAT ATCGGAAGGG ATCTACAATA TCTATTACCT CATGCGCAGG
CGTGGAGGCC CATCAGCAAG GGTCAAAGCC GCAGTCAAGT TCATGGTCAG TCTCTATGAT
CCTGTTTCAG CAGTCAGGAT GTTGATTGAC GAGACTGGTA CTCTTCAGCC GGAGCAATGC
ATAGACCATT ATGCTGCTTT TGAACAGGTG GTTAAAAATA TTTCTGATCG CCAACTTCTA
CAGAGAATAG GTGCTGTTAC GCCGAAAAGT TTTTTGGAGT CACCCTATCT CACTGATACG
GTGAAAAATA GCTTGAGAGT TGAAAGCGTA ACAGAATCGA AAAAGGATAT AAACGAAGGC
GTTGATCGTA AAGCGGTAAT AGAATTGTTT AAAAAGGGAT GTCAATTGGT CAAGGATAAA
GATTATGAGA CAGCAATTCA GTTTTTTGAT CATATCATCA AAAGATATAA AGATCGAACG
GAAGTCGAGA TTAGCTCATT GGTTGTAAGT GCTCTTTTTA ATAAAGGCGT TATACTTCAT
AAACTGGCGC GTGAGAATGA GGCGATTAAG ACGTATGAAG AACTTATTGT AACGTATAGT
AATCGTTATG AAGTTGAGAT AGCTGAGTGG GTTGTAAGTG CTATGTTCAA TAAAGTGACT
GCACTTTGGA CACTCAATCG CAAGGATGAG CTAATTCATG CGTATGAAGA ACTCGTTATA
AAGTATAGAA AACGGACTGA AGTCGAGATT GCAGAATGGA TTGCAAAAGC CCTGTTTAAC
CAAGGGTTTG TGCTTAGTAG TTTAAATCGT GAGGATGAAG GGATTCACAA ATATGAAGAG
CTTGTTGGAT TGTATGGAAC TCGACATGAA GCCGAGATTT CTGAAAGGGT TGTAAGAGCT
CTGTTTAACA AAGGAGTTCT ACTTCTACAA CTCGAACGAT ACCAGGAGGC TGAACCTGTT
TTTATGCAGG CAATTGAACG GGCTCCCCTT ATGTGGGAAG CGTACGTTGA ATTAGTAAAA
TTGTTCTTGA AGATGCCAGA GAGACTGAAT GATGCTCTTG ATTTTGCAAG AAAGTATGTT
GAGACTCCTG GTCTCGTTGA GCAATCAATA GAAGGAGCTA TAAAGCTGTT TGTGGAACTT
GCCGCATCGG GGTATGCGAA AGAGGCACTT GGCATTCTTG TCGATTCTCC TGCTGAGTCC
CATCTTGAAC CTTTGGTGGT TGCTTTACGG TTATACACTG GTGAAGAGGT AAGAAGTGCG
GTTGAGATAC AAGAAGTTGC GAAAGATGTC GTCAAACGGA TTGAGCATCG GCGGAGCGTA
AGGGAAAAAA CGGATGAGCA TGCTCTTGCA TCCTGCCTCT GA
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| Protein sequence | MVKRFVKYNP AFLESDELIE NFVVRQIDFR MITRIIRENT MASNQHMLVI GPRGSGKTTL
VRRIALEVER DEELESACYP LIFAEESYNA VSAADFWLEA LFHLAEHTGD AQMMRTYQEL
RRDPDEQRLG ERALGQLLDF ADKIGKRLLL VVENLDMLLS EFSDKQEAWK LRHTLMNEPR
LMLLATATGR FEEIDHPAHA MFELFKIHEL KALDDQECNT VWELIAGEKL PGEQIRPVRI
LTGGNARLIA LIARFGAKRS FQQLLDDLID LIDEHTDYFK SHLDAMASKE RKVYLALAEL
WSLSTAKEVA EVARLDVNTA SALLNRLVSR SKVLFEEKGK RTKWYRISEG IYNIYYLMRR
RGGPSARVKA AVKFMVSLYD PVSAVRMLID ETGTLQPEQC IDHYAAFEQV VKNISDRQLL
QRIGAVTPKS FLESPYLTDT VKNSLRVESV TESKKDINEG VDRKAVIELF KKGCQLVKDK
DYETAIQFFD HIIKRYKDRT EVEISSLVVS ALFNKGVILH KLARENEAIK TYEELIVTYS
NRYEVEIAEW VVSAMFNKVT ALWTLNRKDE LIHAYEELVI KYRKRTEVEI AEWIAKALFN
QGFVLSSLNR EDEGIHKYEE LVGLYGTRHE AEISERVVRA LFNKGVLLLQ LERYQEAEPV
FMQAIERAPL MWEAYVELVK LFLKMPERLN DALDFARKYV ETPGLVEQSI EGAIKLFVEL
AASGYAKEAL GILVDSPAES HLEPLVVALR LYTGEEVRSA VEIQEVAKDV VKRIEHRRSV
REKTDEHALA SCL
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