Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0247 |
Symbol | |
ID | 6462614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 240564 |
End bp | 241814 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642726541 |
Product | hypothetical protein |
Protein accession | YP_002017200 |
Protein GI | 194335406 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.241657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAGGA CGTTGCGGCA GGCACAGGGA AACTGGGTTG ATGGTGATCG GTTTTGGGGA AGAGCGGATG ATATCAGGAT TCTGACTCGC AAGATTGATG AAGGGGCGCA TATCTCCCTT GTTGCTCAGC GGCGCATGGG GAAAACCAGT CTCATGAAGG AGTTGCAGCG GAGGCTTTCT GATCGCTATA TCTGCCTGTT CATTGATCTT CAGAAAGATT CTGAACCTGC TGATGCAGTT GTTCAACTCA GTCTTTCGAT AAAGCCATAT GAGCCTCTCT GGAAGAGGGT AAAAAGTTTG TTTGCCAATG TGTGGGGTGT GGTATCAGGA GGAATTGAAG AAGTCAGTTA TGGCGATATC GCTCTTAAAT TGAGGGCGGG ACTGAACTCG GGAAACTGGA TGGAGAAGGG TGATGCACTT TTTTCGATTC TTGCAAAATC TGATCGTCCG GTTCTGCTGA TGATCGACGA GGTGCCTCTG ATGGTGAACC GAATGCTGAA GGGGGACGAT TTCGTCATCA CCAAAGAGAG AATAGCAGAA GTCGACAGGT TCATGTCGTG GCTCAGGAAA AACAGTATCG AACATCAGGG AAAGATCAGG ATAATGCTTT CGGGTAGTAT CGGTTTCGAG CCGGTACTGA GGCAGGCAAG GCTGAGTTCG ACGATCAATA ATTATCAACC CTACGATCTC AGTCCATGGG ATGCTGAAAC GGCTACAGGA TGTTTACGTG CTCTCGCTCA GCAGTATGGT ATAGAATTCC TCAATCAGGC AGAAGAGGCA ATGGTCAGAA AGCTCGGTTA CTGTATTCCC CACCATGTCC AGTTGTTTTT TGCGCACGTT CTTGATCGTT GTGACAGGCA AAATGAGATG CAGTTTTCTG CTGATGAGGT TGACGATCTT TACGAACATG AGATGCTTGG CATCCGCGGA CATGCTGAGC TTACGCATTA CCAGGAACGG TTGGAACTTT TTTTCAGTAA GGATAGACTA CCTCTCGTGC TGGCCATTTT AACAGAAACA GCAATTGCCG GTCAGTTGAC CATCCCTGTA ATTCGGGAGC TTCAGCGTGA GTATGCAAGA AAAGAGCCTG GTTCCGATGA AGAGATAAAG GAAATTCTTC GAGTACTTGA GCACGACGGT TATCTCAGGA AGATTGGGGA GGGCTATCGT TACGAATCAA ATCTTTTGAA AGACTGGTGG AAAAAGGCGC ATGCGGAGTT TTATGTTCCG GTGAACAAGA GGGAGAAATA A
|
Protein sequence | MERTLRQAQG NWVDGDRFWG RADDIRILTR KIDEGAHISL VAQRRMGKTS LMKELQRRLS DRYICLFIDL QKDSEPADAV VQLSLSIKPY EPLWKRVKSL FANVWGVVSG GIEEVSYGDI ALKLRAGLNS GNWMEKGDAL FSILAKSDRP VLLMIDEVPL MVNRMLKGDD FVITKERIAE VDRFMSWLRK NSIEHQGKIR IMLSGSIGFE PVLRQARLSS TINNYQPYDL SPWDAETATG CLRALAQQYG IEFLNQAEEA MVRKLGYCIP HHVQLFFAHV LDRCDRQNEM QFSADEVDDL YEHEMLGIRG HAELTHYQER LELFFSKDRL PLVLAILTET AIAGQLTIPV IRELQREYAR KEPGSDEEIK EILRVLEHDG YLRKIGEGYR YESNLLKDWW KKAHAEFYVP VNKREK
|
| |