| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0225 |
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| Symbol | |
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| ID | 6461762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 217743 |
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| End bp | 218207 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726520 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_002017179 |
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| Protein GI | 194335385 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000120265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCTT TAATGAGAAG TCTGTTTATT CCAGCCATGC TCTTTCTGGG GGCTTGCTGC
TGTGGGGAAG ATGTCGTCGT TGCTCCAGCA GCAGCACCAC CACCGCCACC ACCACCGCCG
ATTCAGATAA TTTTGCCTGG CCTCGGTGAT CTTTTCTATG ATTTTGATAA ATCGGATCTT
CGAGCGGATG CCGTCGAACA ATTGAAGACG AATGCCAACT GGATGCAGGT TTTCAAAAAT
AACAGTGTTA TCATCGAAGG CCATTGCGAT GAGAGAGGTA CCAATGAGTA TAATCTTGCT
CTTGGTGAGC GCCGTGCAAA CAGTGCCCGG AATTACACCA TTAATCTTGG TATTGATCCT
GTCCGCCTGA AGACGGTCAG TTATGGGGAA GAAAAACCGT TTGCCACCGG CAGCACTGAG
GAGGCTTGGG CTCAGAACAG AAGAGCTCAC TTTGTTGCTG AATAA
|
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| Protein sequence | MKSLMRSLFI PAMLFLGACC CGEDVVVAPA AAPPPPPPPP IQIILPGLGD LFYDFDKSDL
RADAVEQLKT NANWMQVFKN NSVIIEGHCD ERGTNEYNLA LGERRANSAR NYTINLGIDP
VRLKTVSYGE EKPFATGSTE EAWAQNRRAH FVAE
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