Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0217 |
Symbol | |
ID | 6461888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 210624 |
End bp | 211763 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642726512 |
Product | Serine--glyoxylate transaminase |
Protein accession | YP_002017171 |
Protein GI | 194335377 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GACTATTTAC ACCAGGGCCA ACCCCTGTGC CAGAAAATGT CATGCTTCGC ATGGCCGCAC CGATTATCCA TCACAGGAAC CCCGAGTTCA TGGAGATTCT GACCAGGGTT CACGCCGATC TCAAGTATCT GTTCCGAACA ACCCAGCCTG TTGTTGTGCT CAGTTGTTCG GGGACTGGCG GCATGGAAGC AACAATTTCG AGCATCTTCA AACAGGGCGA CAAGGTCATT ACCATCAATG CCGGCAAGTT TGGCGAACGT TGGGGAGAAC TGGTACGCGT CTTTACCGGA AATTGCGTTG AGGAAAAGGT GGCATGGGGT TCCGCCATTC AACCAGAAAG AATGGCAGAG CTGCTCAAGG AGCATCCGGA CGCAAAAGCT GTCTGCCTTA CCCATTCGGA AACCTCAACG GGCACGGCTG CTGATATCAA AACACTCAGT GCACTGATCC GTGAAGAGTC AGACGCACTG GTGCTGGTTG ATGGCATTAC TGCGGTCGGG GCACATGAGT TCCATTTTGA TGACTGGGGC GTCGATGTCT GCATCACCGG TTCACAGAAA GGACTGATGA TGCCACCGGG GCTTGCGCTG GTAGCCATAT CCGAAAGAGC CCAGGATATC ATCAAGGGCC AAAGCGGTAT GCCACAGTAT TACATGAGCC TGAAAAAAGC CCTGAAAGCC CATGCTGGCG ACGACACTCC TTTCACTCCG GCTGTTTCGC TGGTAATCGG CCTTGATGAG GCATTGCAGA TGATCAAGGC TGAAGGGATT GAAAATATCT GGAAACGGCA CGAAAGCCTT GCCAATGCTT GCCGTCAGGG ATGTAATGCG CTTGGCATGA AGCTCTTCAG CAACTCCCCG TCGTTTGCCG TTACTCCCGT ATGGATCCCT GAAGGGGTAA AGTGGTCGGC ATTCAACAAA GCGCTGAAAA ACAGCAATGG CATAACCGTT GCCGCTGGTC AGGATGAGTA CAAGGACAAG ATTTTCCGTA TCTCTCATCT TGGTTTCTAC GATGAGCTCG ACATGCTGAC CGTCATCGGT GGGATTGAAC GTGCGCTGAA GGAGATCAAC TTTGATTTTG AAATTGGCGC GGGCGTCAGC GCTGTACAAA AAGCATTTCT TGGCAACTAA
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Protein sequence | MKKRLFTPGP TPVPENVMLR MAAPIIHHRN PEFMEILTRV HADLKYLFRT TQPVVVLSCS GTGGMEATIS SIFKQGDKVI TINAGKFGER WGELVRVFTG NCVEEKVAWG SAIQPERMAE LLKEHPDAKA VCLTHSETST GTAADIKTLS ALIREESDAL VLVDGITAVG AHEFHFDDWG VDVCITGSQK GLMMPPGLAL VAISERAQDI IKGQSGMPQY YMSLKKALKA HAGDDTPFTP AVSLVIGLDE ALQMIKAEGI ENIWKRHESL ANACRQGCNA LGMKLFSNSP SFAVTPVWIP EGVKWSAFNK ALKNSNGITV AAGQDEYKDK IFRISHLGFY DELDMLTVIG GIERALKEIN FDFEIGAGVS AVQKAFLGN
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