Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0211 |
Symbol | |
ID | 6461960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 204933 |
End bp | 206276 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642726506 |
Product | hypothetical protein |
Protein accession | YP_002017165 |
Protein GI | 194335371 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.829606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCACAG GCTTCGCTCG TTATCGCTAC CGCCCTTTTT TACTGCTTAT CCTGGCGCTC CTTTGCGTTC CGGCATTCGC CGGAGCGTCA AAGGTGCTCG AAACCGAGCC ATTCCTTGCC TCCTCAATAA ACAACGATCA CCCCTTTGTA GGCCAGGAGG TACTCCTGAC CTATCGGCTC TATTTTAATA CTGACGCACC AAAAATATCT GATGAAGTAG CTCCTTCTCT TCAGGGAGTA TGGGCAAGTG AAACCAAAAC AGAACGCTTT ATCAGAAGTA TCCCGGTAAC AATTCAGGGA AAGCAGTTCA GAAGTGCCGT CATCAAGCAG TTCAAAGTGG TACCCATCCA GAGTGGCAAA ATCACCTTGT CAGGCTACAG CATGCTGTGC ACCATCCCGC AGGATAACGT CGCAATGGAT GGAAAAGTAC TCCCTGACAA CCGTTTCCGT ATAACAGCGC CCGCGCTTAC CATCTCTGTC CATGCCCTGC CGGAACCCGT TCCGGATAAA CTTTCCGGGG CAGTAGGCCT CTTCTCGCTC AACCTCATGG CCGACAAGCA AAAGCTCAAA ACAGGAGAGC CACTCTCCCT GAAACTGACA CTCGCCGGAA CAGGGAGCCT CCTTACCCTT GAACTTCCCA GCCTGCTCAT CCACGAGAGT TTTCGTCGTA ACCCTCCGGA AAGAAAAACA ATCCTGTCAA AAGAGTCAGA GTTGACATCG GGCACTATTA TCTCAACAAT GGTAGTCTGG CCCCAATCGA AAGGTGTTTT TCAGATCACC GCAACACCGC TTGTTGTTTT CAATCCTGAA ACAAAACGGT TCAGCACTCT TTACGCACAA CCTCTCACCA TAACAGTCGA CTCAACAGCA CAACAAGCTA CAGCCGACGA AAGTGCTCCT CTCAATACCT CTACAGAAAA AAAGAAAACC ATCACCTCAA TCTTCATTGC AATCGCATTG CTGATAGTAA TGAGCTCTGC AGCAATTGTT TTGGTAAGAA AAAAGCGTCT TATGGACGCA AAGCGTGTAC TGGCTGAAAA CAAAAGTGAA CAACCAGAAG CGTCTGGAAA ATCTGCCCGA ACCATGAAAG AGCAACTTTT CACCTTGCTG GAAGAGGCAG GCATAAAAAG CCCTGGAGGT ATGACAAGGA CAGAGCTGAA CGATGCGATG CAGGAAATCA AAATCCCCGA TGAAACCCGC TCAGAACTCC CCGTTGTGCT TGACTCATTG GACAGAATCC TTTACAGCCC TTCCAGAGAA AAAGAGAGCC GAATCCCTGA CTGGATTACA ACAAAAGTTG AAGCTCTCTT GCGTGCACTG AAAAAAGCAG GCTCTTCACG CTGA
|
Protein sequence | MATGFARYRY RPFLLLILAL LCVPAFAGAS KVLETEPFLA SSINNDHPFV GQEVLLTYRL YFNTDAPKIS DEVAPSLQGV WASETKTERF IRSIPVTIQG KQFRSAVIKQ FKVVPIQSGK ITLSGYSMLC TIPQDNVAMD GKVLPDNRFR ITAPALTISV HALPEPVPDK LSGAVGLFSL NLMADKQKLK TGEPLSLKLT LAGTGSLLTL ELPSLLIHES FRRNPPERKT ILSKESELTS GTIISTMVVW PQSKGVFQIT ATPLVVFNPE TKRFSTLYAQ PLTITVDSTA QQATADESAP LNTSTEKKKT ITSIFIAIAL LIVMSSAAIV LVRKKRLMDA KRVLAENKSE QPEASGKSAR TMKEQLFTLL EEAGIKSPGG MTRTELNDAM QEIKIPDETR SELPVVLDSL DRILYSPSRE KESRIPDWIT TKVEALLRAL KKAGSSR
|
| |