Gene Ppha_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0206 
Symbol 
ID6462431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp201674 
End bp202342 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID642726501 
ProductABC transporter related 
Protein accessionYP_002017160 
Protein GI194335366 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.384968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTC CTGTTATCGA GTGTAACCGG CTTTCGGTCG AGCTTGGGGG AGTAATGGTG 
CTTGATGGCG TGACCCTGTC AGTCTGCAAG GGAGATTATC TCGGTCTTGT CGGGCCAAAT 
GGCGGGGGGA AGACCACATT GCTCAGGGTG ATTCTTGGCT TGGAGAAATC ATCCGGGGGG 
AGTGTGAGCG TTTTTGGTGC TCTGCCCGGA AGCTTTCCTG AGCGTATCGG TTATGTACCC 
CAGCGGCTGT TTTTTGACCG CGAATTTCCG ATCAGTGTTC GTGAGCTGGT GCTTATGGGG 
AGGCTGTCGA AAAAAAAACT GTTTCAGCAC TTTAACCGTA TCGACAGGGA GAAGGCTGAT 
GCGGCGCTTG GCGTGGCTGG TCTGGAACGG CTGGCTGATC GGAGGATTGG TACCTTGTCG 
GGAGGAGAGT TGCAGCGGAC TCTTATTGCC CGGGCTCTTG CCGGGGAGCC CGAATTGCTG 
CTGCTCGATG AACCGACAGC AAGCGTTGAT CCGCAGATGA AAACCACCAT TTACGATTTG 
CTCGATAACC AGAAAAAAAA GCTCACCATA GTCCTTGTCA GCCACGATAT CGGAGGAATA 
AAAGATCATG TGAGTGGAAT TGCTACTCTG AACACTACCC TTTATGCTCC AAGAGATATT 
TGCCTTTGA
 
Protein sequence
MTTPVIECNR LSVELGGVMV LDGVTLSVCK GDYLGLVGPN GGGKTTLLRV ILGLEKSSGG 
SVSVFGALPG SFPERIGYVP QRLFFDREFP ISVRELVLMG RLSKKKLFQH FNRIDREKAD 
AALGVAGLER LADRRIGTLS GGELQRTLIA RALAGEPELL LLDEPTASVD PQMKTTIYDL 
LDNQKKKLTI VLVSHDIGGI KDHVSGIATL NTTLYAPRDI CL