| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0204 |
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| Symbol | |
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| ID | 6462588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 198936 |
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| End bp | 200618 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726499 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002017158 |
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| Protein GI | 194335364 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.110157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TGAAGTATCG GAAGTATGCA GCGTATCCTT CGGTGGCCAT TACCGCAAGG
AGCTGGCCTG ACAAGAGCAT TACGAAAGCG CCGATATGGT GCAGTGTCGA TCTTCGTGAC
GGAAACCAGG CGCTGCCCGT GCCGATGAGC GTTGAGGAAA AGGTAACCAT GTTCCAGCTT
CTTGTTTCTA TTGGTTTCAA GGAGATTGAG GTTGGTTTTC CCTCAGCTTC GGCTACGGAG
TTTGCTTTTG CCCGTCGGCT TATCGAAGAG CGTCTTATTC CTGATGATGT GACGATTCAG
GTGTTGACCC AGGCGCGGGA GCACCTGATA CGCAAGACCT TCGATGCCAT CAGCGGAGCG
AAACATGCCA TTGTTCATCT CTACAACTCG ACATCGACTT TGCAGCGGGA TGTGGTTTTC
CGCAAAAACA GGGAGGAGAT CAAGGCGATT GCTGTTGAAG GAACGGCGCT TGTTCGCCGC
CTGAAGGATG AGAGTGGTAA TGCGGGAATC CGTTTCGAGT ACAGCCCTGA AAGTTTTACC
GGTACGGAGC TTGATTATGC GCTTGATGTC TGTCATGCGG TTATGGATAC CTGGGGCGCT
TCTGCGGATG AAAAGATCAT TCTGAACCTT CCCTCAACGG TTGAAATGTC GCAGCCGAAT
ATTTATGCCG ACCGCATTGA GTGGTTCTGC CGCAACATCA AGGCGCGGGA TGCTGTTCTG
ATCAGTGTGC ACGCTCATAA TGACCGTGGA ACTGCGGTTG CTACTGCTGA ATTGGCGGTG
ATGGCCGGTG CTGACCGTGT TGAGGGCGCC TTGTTCGGTA ATGGCGAGCG GTGTGGTAAC
ATGGATGTTG TCATTATGGC GCTGAACCTT TTCAGTCAGG GCGTCGATCC TGAGCTGGAT
TTTTCCGATC TTCCACGGAT ACGTGAGGTT TATCGCCGCT GTACCCGTAT GGATATTCAT
CCTCGTAATC CCTACTCGGG GGAGTTGGTC TATACGGCTT TTTCCGGTTC GCATCAGGAT
GCAATCAGCA AGGGGATGAA AGCGCAACCT CTCTCACCCG GTGGGTTGTG GGCTGTTCCC
TATCTGCCGA TTGACCCTCA GGATGTTGGT TGCAATTATG AGGCTATCGT GCGTATCAAC
AGTCAGTCGG GTAAGGGTGG GGTGGCCTAT GTGCTGGAGA AGGAGTATGG TATCCAGATA
CCGAAATGGA TGCAGCCTGA TTTTGCTGAA GTGGTACAGG CTGTTGCTGA TACGACTGGT
GTCGAGTTGT CGGTGGAGCA GATTCATGAT CTTTTTCATG CTGAATATGT CAAACTCCGG
CAGCCGATTA CGCTCAAGAA GTGTCAGATC AGTTGGGATG ATGAAGAGCC TCGTCGTCAG
GATGAAGAGG ATACCACCAT AAGCTGTATC GTACAGACCC GGGAGAAGGA GTTCAATTTC
ACCGCACAGG GTAATGGTCC TCTTGATGCC TTTGTCAAAG GATTTGTGCG GGAGAGTGGA
GTGGATTTCA GTGTTGATGA GTATGCAGAA CATGCTATCG GGCGAAGCGC CGGGGCTCTT
GCTATAGCTT ATATCAAGAT TGGCTGTACC GATGGACGGG TTTCTTTTGG TGCAGGGATC
GATTCGAATA TCAGTCTTGC CTCAATCAAG GCAACGGTAA GTGCCCTGAA CAGACTGCCG
TAA
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| Protein sequence | MKKMKYRKYA AYPSVAITAR SWPDKSITKA PIWCSVDLRD GNQALPVPMS VEEKVTMFQL
LVSIGFKEIE VGFPSASATE FAFARRLIEE RLIPDDVTIQ VLTQAREHLI RKTFDAISGA
KHAIVHLYNS TSTLQRDVVF RKNREEIKAI AVEGTALVRR LKDESGNAGI RFEYSPESFT
GTELDYALDV CHAVMDTWGA SADEKIILNL PSTVEMSQPN IYADRIEWFC RNIKARDAVL
ISVHAHNDRG TAVATAELAV MAGADRVEGA LFGNGERCGN MDVVIMALNL FSQGVDPELD
FSDLPRIREV YRRCTRMDIH PRNPYSGELV YTAFSGSHQD AISKGMKAQP LSPGGLWAVP
YLPIDPQDVG CNYEAIVRIN SQSGKGGVAY VLEKEYGIQI PKWMQPDFAE VVQAVADTTG
VELSVEQIHD LFHAEYVKLR QPITLKKCQI SWDDEEPRRQ DEEDTTISCI VQTREKEFNF
TAQGNGPLDA FVKGFVRESG VDFSVDEYAE HAIGRSAGAL AIAYIKIGCT DGRVSFGAGI
DSNISLASIK ATVSALNRLP
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