Gene Ppha_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0199 
Symbol 
ID6461868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp195348 
End bp196337 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content52% 
IMG OID642726493 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_002017153 
Protein GI194335359 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.477359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTG CAATCACGGC GACAGCCAAA TATTTACCTG CCAATATTCT GAGCAATCAT 
GACCTCGAGC TCATGCTTGA CACCAATGAC GAATGGATTC GTGCGAGGAC GGGCATCAGC 
GAACGCAGGG TACTCAAAGA TCCGGAAAAA GCGACATCAT ACATGTGCGG AGAGGTTGGA 
AAACAGCTTC TCGAAAAACG AGGCATCGCG GCAAGTGAGA TTGAGTTAAT CATTGTAGCC 
ACCATGACCC CGGACATGCT CTTCCCCTCC ACAGCATGTT TTACACAAAG CATCATCGGA 
GCCAGCAACG CCTGGGCCTT TGACATAAAT GCTGCCTGCT CCGGTTTTCT CTACGCCCTG 
AACGTTGGGT CACGCTTTAT CGAAAGCGGA GCCCACAAAA AAGTTATGGT CATCGGCGCC 
GACAAAATGT CGGCAGTTAT TGATTATACC GATCGCTCGA CAGCCATCCT TTTTGGTGAC 
GGCGCTGGCG GCGTCATCCT TGAACCGGCA AAAGAAGAGG GATTCGGCAT TCTCGATACG 
CGCCTCTACG CTGACGGAGC AAACGGCACA GATCATCTTC TCATGACTGG CGGCGGCAGC 
CGGTATCCGG CAAGCCATGA GACGGTAGAC AAAAAAATGC ACTACATCTA TCAGGACGGC 
AAACAGGTTT TCAAGGCTGC CGTCATGGCC ATGGCAGAGG TTGCCGGTGA AATCATGAGC 
CGCAACAATC TCACTGCAGA TGATATCGAC TACCTTGTAC CCCACCAGGC AAATCAGCGG 
ATCATCAACG CCACCGCAGA GCGCATGGGC ATTGATGACA AAAAAGTTAT CTCGAACGTT 
GCCCGTTATG GCAACACAAC AGCAGGCACC ATACCGATCT GCCTTGCTGA ACTTGATGAA 
GGGCAGAAAT TGCACACCGG CTCAAACCTG GTGCTGGTCA GTTTCGGCGC AGGCTATACC 
TGGGGTGGCA CCTATATTAA ATGGCAGTAA
 
Protein sequence
MKAAITATAK YLPANILSNH DLELMLDTND EWIRARTGIS ERRVLKDPEK ATSYMCGEVG 
KQLLEKRGIA ASEIELIIVA TMTPDMLFPS TACFTQSIIG ASNAWAFDIN AACSGFLYAL 
NVGSRFIESG AHKKVMVIGA DKMSAVIDYT DRSTAILFGD GAGGVILEPA KEEGFGILDT 
RLYADGANGT DHLLMTGGGS RYPASHETVD KKMHYIYQDG KQVFKAAVMA MAEVAGEIMS 
RNNLTADDID YLVPHQANQR IINATAERMG IDDKKVISNV ARYGNTTAGT IPICLAELDE 
GQKLHTGSNL VLVSFGAGYT WGGTYIKWQ