| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0178 |
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| Symbol | |
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| ID | 6462179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 174094 |
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| End bp | 175869 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726473 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_002017133 |
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| Protein GI | 194335339 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.351864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AATCTCGACT CGCTCTCTTT CCCCTTTTCA TCCTCCTGCT GTTGATGACA
GCAGGAGAGA CAGGATCAGC AAAATCAAAA CCGGGCACGG AAAAGTGGTG CGCCCAGCAA
ATTTTCAGCC GTAAAGATTC CCATATCGAA GAGAGCCTGA AAGGCTTGAC ACTCTCCGAA
AAGGTTGGTG AGATGCTTAT CGCCCAAATT GAGGCCCATT ACAGCGGCAG TTACGACAAG
GAGTACCAGC TTCTGAGCCG ACTGGTGCAG GAGGGCAAGA TCGGAGGCAT TATGTTCCTC
AAGGGTGATG CCTTCAGCGC GGCCATGCTC GCCAACCATT TTCAGTCGAT TGCACCACGC
CCTCTGCTTA TGAGCGCCGA TATGGAGCGG GGTGTCGCCA TGCGGCTGAG CGGAGCTACC
GAATTCCCGC CAAACATGGC TGTGGCAGCA ACACAGGATC CTGAACTCGC CGCCCTGATG
GCAAAAGCCA TAGCGGAAGA GGCAAAAATT GTCGGGCTCC ACCAGAACTA TGCCCCGACG
GTTGACCTGA ACAGCAACCC GCTCAATCCC ATCATCAATA CCCGTTCGTT CGGCGACCGT
ATACCCCTGA CCATTACCAT GTCCAATGCC GTCATCAAAG GGCTTCAGTC GCACGGTATG
ATTGCAACCG CAAAACACTT TCCGGGGCAT GGTAACGTTA CCATCGACAG CCATATCTCG
CTCCCTCTCC TCCAGGCTGA CCGCCAGGAA CTGGATGCCT ATGAACTGAA ACCGTTTAAA
GCCGCCATAG AACAGGGGGT CATCTCTATT ATGATCGGAC ATCTTGCTGT ACCGAAACTG
ACCGGCACCC TGGAGCCCGC CTCCATTTCC AAAACAATCG TCACCGACCT GCTCCGTCAT
GATCTTGGAT TCACCGGGCT GATCATTACC GATGCCCTCA ACATGAAAGC GCTTTACAAC
GGCGAGAATG TCCCGGAAAT TTCTGTAAAA GCTGTTCAGG CTGGCAATGA CCTCCTCCTC
TTTTCACCCG ATCCCGAGCT TGCCCACTCC TCCATCGTCA AAGCTGTCGA AGAGGGCGTT
ATTCCGATGG AACAGATTGA TGCATCGGTA CGCAGAATCC TTCAGGCGAA ACAGTGGCTT
GAGATTGACA ACCGGAAACT TGTCAATCTG AACCGGATCA AAGATGAGAT AAACCCCGAA
TCTCACCGCA CGCTTGCGCA AACCATTACC TCACGAGCCA TTACGCTGGC TGGCGACGCA
AACCACTACC TTCCCCTGAA CAGGGAGGCC TCCTCAGGCA ATGTGCTCAA TATCATCCTG
CAGGATAAAA CCAATAGTGA AACCGGAAAA GGATACAGCA AAAAACTCGA TCACTATTAT
GCCGCCACGC ATATCAGAAT TGACCCCGAT ACCGACTCTC TCCGTTACGC GAACGCCACT
GAACTTGCAA CCAGGGCGTC GGCTGTTCTC GTCACCTCCT TTGTCAAGGC GCTCTCCGGT
TCTGGCACCC TGAAACTGAC GGAAAAGCAA CAGCAGTTTA TCCACTCGCT GACCGGTATC
GTGCCAAAAG AGAAGCCCCT GATCTTTGTA TCGTTTGGAA CCCCATACAT CATCAACTAT
TTTCCTGAAA TAACCACCTA TCTCTGCACC TACTCCGAAA ACGACTCATC TGAAGAGATG
GCGGTAGAGG TACTGAAGGG GAATCTTACC CCCCAGGGAA TGCTCCCTGT TTCACTGCAG
GAGCCGTCAC GTTTGAACGG AACATCATTG CAATAA
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| Protein sequence | MKKQSRLALF PLFILLLLMT AGETGSAKSK PGTEKWCAQQ IFSRKDSHIE ESLKGLTLSE
KVGEMLIAQI EAHYSGSYDK EYQLLSRLVQ EGKIGGIMFL KGDAFSAAML ANHFQSIAPR
PLLMSADMER GVAMRLSGAT EFPPNMAVAA TQDPELAALM AKAIAEEAKI VGLHQNYAPT
VDLNSNPLNP IINTRSFGDR IPLTITMSNA VIKGLQSHGM IATAKHFPGH GNVTIDSHIS
LPLLQADRQE LDAYELKPFK AAIEQGVISI MIGHLAVPKL TGTLEPASIS KTIVTDLLRH
DLGFTGLIIT DALNMKALYN GENVPEISVK AVQAGNDLLL FSPDPELAHS SIVKAVEEGV
IPMEQIDASV RRILQAKQWL EIDNRKLVNL NRIKDEINPE SHRTLAQTIT SRAITLAGDA
NHYLPLNREA SSGNVLNIIL QDKTNSETGK GYSKKLDHYY AATHIRIDPD TDSLRYANAT
ELATRASAVL VTSFVKALSG SGTLKLTEKQ QQFIHSLTGI VPKEKPLIFV SFGTPYIINY
FPEITTYLCT YSENDSSEEM AVEVLKGNLT PQGMLPVSLQ EPSRLNGTSL Q
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