| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0173 |
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| Symbol | rplT |
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| ID | 6461497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 169240 |
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| End bp | 169587 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726468 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_002017128 |
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| Protein GI | 194335334 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.258486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTAAAG CAAATAATGC CGTCGCCTCA AAAGCACGGA GAAAAAGAGT ACTCAAAAAA
GCCAAAGGGT TCTGGGGATC ACGCGGCAAT ATTCTGACCG TCGTCAAACA TGCGGTCGAT
AAAGCAGAAC AGTACGCCTA CCGTGACCGT CGCGTCAAAA AACGCACCTT CCGTTCGCTC
TGGATCATGC GTATCAACGC CGCTGCACGC CTCAACGGCA CCACCTACTC CCGCATGATC
AACGCCATGC TGAAGAAGAA CGTCGAAATC GACCGCAAGG CACTTGCCGA GATCGCCGTA
AAAGATCCCG CAGCATTCAC CGTGATTGTT AAAAGCCTTT TCGAATAA
|
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| Protein sequence | MPKANNAVAS KARRKRVLKK AKGFWGSRGN ILTVVKHAVD KAEQYAYRDR RVKKRTFRSL
WIMRINAAAR LNGTTYSRMI NAMLKKNVEI DRKALAEIAV KDPAAFTVIV KSLFE
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