Gene Ppha_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0172 
SymbolpheS 
ID6461941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp168193 
End bp169221 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content55% 
IMG OID642726467 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_002017127 
Protein GI194335333 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.695607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA CCATTCGCAG TTTACAGCAG GAGATCATTG ACTTTGAGAT TACCACAGCG 
GCCGATCTCG AAGCTTTCCG CCTCAGGTAC ACCGTTCGGA AAGGACTCAT TGCAGCCCTT
TTCGGCCAAC TCAAAACGGT TGAACCTGCT GAAAAACCGC GAATGGGCCA GTTGCTCAAC
CAGCTCAAGC AGACGGCTGA TGCAAAGCTC ACCGAAGCAG AGGAGAGGCT TGCCGGAACC
GAAAGCAAGA GCAGCAGCAA TAGAATTGAC CTCACCCTTC CCGGACGACG CTACTTCACC
GGCAGCGAAC ATCCGGTACA GAAGGTGCTT GGTGAAATGA AATCGATCTT CTCAGCCATG
GGATTCGGCA TTGCAACCGG CCCCGAACTT GAGACCGATC AGTACAACTT CGACCTGCTC
AACTTTCCGC CCGACCATCC GGCACGCGAC ATGCAGGACA CCTTTTTTGT CACCAGCGGC
AACCCCGGCT CGGACGTGCT TCTCAGAACC CACACCTCCC CCGTGCAGAT CAGGGTCATG
CTCGACCAGA AACCACCCAT ACGGGTCATC TGCCCAGGAA AGGTCTACCG CAACGAAGCC
ATCAGCTCCC GAAGCTACTG CGTCTTCCAC CAGCTCGAAG GGCTCTACAT CGACAAGAAG
GTCTCCTTCG CCGATCTCAA AGCCACCATC TACTCCTTCG CAAAACAGAT GTTCGGCACC
GACGTCAAAC TCCGGTTCCG CCCAAGCTTT TTCCCCTTCA CTGAACCATC AGCCGAAGTG
GACGTCACCT GCTACCTCTG CGGTGGCAAG GGATGCAAAG TCTGCAAAAA ATCAGGCTGG
CTCGAAATCA TGGGCTGCGG CATGGTTCAT CCCAACGTCA TGCGCAACTG CGGCATAGAC
CCCGAAGAGT GGTCAGGCTA CGCCTTCGGC ATGGGTGTTG ACCGCACGGT GCTGCTCAGG
TACAAGATTG ACGATATCAG GTTGCTGTTT GAGAATGATT TGAGGATGCT GAAGCAGTTT
ACGGCGTAA
 
Protein sequence
MENTIRSLQQ EIIDFEITTA ADLEAFRLRY TVRKGLIAAL FGQLKTVEPA EKPRMGQLLN 
QLKQTADAKL TEAEERLAGT ESKSSSNRID LTLPGRRYFT GSEHPVQKVL GEMKSIFSAM
GFGIATGPEL ETDQYNFDLL NFPPDHPARD MQDTFFVTSG NPGSDVLLRT HTSPVQIRVM
LDQKPPIRVI CPGKVYRNEA ISSRSYCVFH QLEGLYIDKK VSFADLKATI YSFAKQMFGT
DVKLRFRPSF FPFTEPSAEV DVTCYLCGGK GCKVCKKSGW LEIMGCGMVH PNVMRNCGID
PEEWSGYAFG MGVDRTVLLR YKIDDIRLLF ENDLRMLKQF TA