Gene Ppha_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0164 
Symbol 
ID6462269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp164076 
End bp164399 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID642726463 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002017123 
Protein GI194335329 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.862423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG CTACAACATA TAAAAGCGAT GCCCTTGCGG CGGTTCATGA AACAGCTTCA 
GACATGTTCG AGGCTGGCGT GATTGACAAA CAGACAATGC GTCACTTCGA CGAATCCTGC
TTGACACCGA TTCACCCATT CAGCCCGGAA GAGATCAAGG CATTGCGTGA ACGTGAAGAG
GTGAGTCAGA GAGTTTTTGC TCACTATCTG AACGTAACAA AGGAATCGGT AAGTCAATGG
GAACGAGGAC AAAAGAAACC TGCCGGAACA ACCTTGAAAC TTCTTTCTCT TGTAGAACGG
AGAGGAATTA ACGCTATTGC CTGA
 
Protein sequence
MSKATTYKSD ALAAVHETAS DMFEAGVIDK QTMRHFDESC LTPIHPFSPE EIKALREREE 
VSQRVFAHYL NVTKESVSQW ERGQKKPAGT TLKLLSLVER RGINAIA