Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0164 |
Symbol | |
ID | 6462269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 164076 |
End bp | 164399 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642726463 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002017123 |
Protein GI | 194335329 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.862423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAG CTACAACATA TAAAAGCGAT GCCCTTGCGG CGGTTCATGA AACAGCTTCA GACATGTTCG AGGCTGGCGT GATTGACAAA CAGACAATGC GTCACTTCGA CGAATCCTGC TTGACACCGA TTCACCCATT CAGCCCGGAA GAGATCAAGG CATTGCGTGA ACGTGAAGAG GTGAGTCAGA GAGTTTTTGC TCACTATCTG AACGTAACAA AGGAATCGGT AAGTCAATGG GAACGAGGAC AAAAGAAACC TGCCGGAACA ACCTTGAAAC TTCTTTCTCT TGTAGAACGG AGAGGAATTA ACGCTATTGC CTGA
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Protein sequence | MSKATTYKSD ALAAVHETAS DMFEAGVIDK QTMRHFDESC LTPIHPFSPE EIKALREREE VSQRVFAHYL NVTKESVSQW ERGQKKPAGT TLKLLSLVER RGINAIA
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