| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0146 |
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| Symbol | |
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| ID | 6461350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 155255 |
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| End bp | 155719 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726449 |
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| Product | transcriptional regulator, BadM/Rrf2 family |
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| Protein accession | YP_002017109 |
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| Protein GI | 194335315 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.274156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAC TGACCAAGAA TACGGATTAC GCGATACGGG CATTGCTGGC GCTTGCTGCA
AGGAAGGGGA GCTATGTGTC TGCCAGGTCT ATTGCGACGG AGCACGATAT CCCGTACCAG
TTTTTGCGTG GCCTTTTGCA GGAGATGATT CGCCACGATC TGATTGTTTC AAAAGAGGGT
GTTCAGGGAG GCTTTATGAT GAAAAAGGAT CCGGATACTA TCAGCGTAAC GCAACTGATT
GAAATTTTTC AGGGCAAGGT GCAGATGTCG GAGTGCATGT TCCGCAAGCA GATTTGTGGC
AATCGTGCGC GTTGTGTGCT GCGTCATGAG ATCATGCGTA TTGAACAGGT TGTCCAGAGC
GAGTTTGAAA AGGTGACCAT CGGCAAGCTG ATGCGTGACC TTCAGGCGGC AAATCAGGTG
AAACCCCCAT CAGTAGACCT TGAGCAGGAA ATGTTGAACC CATAA
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| Protein sequence | MKVLTKNTDY AIRALLALAA RKGSYVSARS IATEHDIPYQ FLRGLLQEMI RHDLIVSKEG
VQGGFMMKKD PDTISVTQLI EIFQGKVQMS ECMFRKQICG NRARCVLRHE IMRIEQVVQS
EFEKVTIGKL MRDLQAANQV KPPSVDLEQE MLNP
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