Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0133 |
Symbol | |
ID | 6462515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 144289 |
End bp | 145068 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642726437 |
Product | ATPase (AAA+ superfamily)-like protein |
Protein accession | YP_002017097 |
Protein GI | 194335303 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACGC GTCATCTCCT GTTCGCTGGT GGCTATCCGC GTATTCATGC AGATCACCTT GATCCGGCAG TCATGCTCGG AGATTATTTT GCCACCTATG TTGAACGCGA TTTGCGGGAT TTGATACAAT TACGCTCAAT CCGGCAATTT GAAAACTTTG TCCGCCTGGC AGCAGGAAGA GTGGGACAAC TGCTCAATCT GCAGTCTCTT GCTGCTGATG CCGGGGTTTC AAGTGTGACA GCAAAAAGCT GGCTTACCCT GCTTGAGGCC TCCTATATTG TTTTTTTACT TCCCCCGTGG TTTGCCAATG TCGGAAAACG ATTGACAAAG TCGCCAAAAC TCTATTTTTA CGATGTAGGT TTGGCTTCCT GGCTGATCGG AATAACACAG GAGTCACATC TGCAAGCTCA TCCCTTGCGA GGATCGCTGT TTGAAAATCT GGTGGTTCTT GAAATGCTCA AGGCTCGCAT CAATGATGGC CTGGCAGCAA ATCTTCATTT TTATCGCGAC AGCAGTGGAC TGGAAGTTGA TGTTCTGCTG GAAGCGGGTA ATATGATAAG GCTCTTCGAA ATCAAGTCAT CGCAGACGAT TAATCAGGAG AGTTTCATAC AACTCAATAA AGTTGCTGCT ATTTTTGGTG AACGTGTCGT GAAAAAAGTG GTGCTCTATG CTGGTCATGA ACAACAAGAA CGCAGTAATT CCACGGTGTC AAGTTATCTG TATGCCGGTG AAGCCGCAAC CAACGAAGGT ATCTTGGGGT CTGCTCACGA AACGGACTAA
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Protein sequence | MITRHLLFAG GYPRIHADHL DPAVMLGDYF ATYVERDLRD LIQLRSIRQF ENFVRLAAGR VGQLLNLQSL AADAGVSSVT AKSWLTLLEA SYIVFLLPPW FANVGKRLTK SPKLYFYDVG LASWLIGITQ ESHLQAHPLR GSLFENLVVL EMLKARINDG LAANLHFYRD SSGLEVDVLL EAGNMIRLFE IKSSQTINQE SFIQLNKVAA IFGERVVKKV VLYAGHEQQE RSNSTVSSYL YAGEAATNEG ILGSAHETD
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