Gene Ppha_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0127 
Symbol 
ID6462409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp141808 
End bp143046 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content53% 
IMG OID642726436 
ProductATPase (AAA+ superfamily) 
Protein accessionYP_002017096 
Protein GI194335302 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.803222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG CTTCTCATTA CTCTCGCCTG ATTGAAATGC GCATTGCTGA AGCGTTGGCC 
GACACTCCCG TGGTTTTGGT TGCAGGGCCG CGTCAGGCAG GCAAAACAAC CCTGGTGCGA
CAAATGGCAA TCGAAGGGAT GCGCTATCTC ACACTTGATG ACGAGTTGAC GTTGTTGTCT
GCCAGAAATG ATCCGGTCGG GATGATTCGC AGCCTTGATT GTGCTGTCAT TGATGAAATC
CAGCGTGCGC CTCAACTGCT GCTTGCTATC AAAAAGAGTG TTGATGAGGA TCGGCGCCCC
GGGCGGTTCT TGCTTACCGG ATCAGCGAAC TTGATGGTAC TGCCTGCGGT AGCGGATTCT
CTGGCTGGCC GCATGGAGAC GCTCACCTTG CTGCCGCTGT CGCAAAGCGA GTTGCATGGG
AGTACGGCGA ATTGGATCGA TGCGGCTTTT GCAGGCAGGC TGCTCAAGGT CACCATGCCG
GTGACAGGTG ATGAATTGTG CGAGGTTGTT TTGCGGGGCG GCTATCCTGA AGCGATTTCC
CGCACCGATG CACGCAGGCG TACGGTGTGG GCGCGCCAGT ACCTTAATGC CATCATTCAA
CGCGATGTCC GCGATGTGGC CAGCATCGAC AAGCTCGATC AATTGCCAAG GTTTTTGCGC
ATCCTGGCTG AAATATCAGG TCAGATGTGT AATTACACCA AACTGGGTGG TCAGGTCGGT
TTGGACAGCA AGACGGCTTC ACGCTATACA GGAGTGCTGG AACAGATGTA TTTGCTTAAG
CGCATTGAGG TCTGGGCCAG GAATCGACTC AAGCGTGTTG TCAAAACCCC CAAGTTGCAG
TTTATTGATG CCGGTTTGCT GGCCACATTG CTTGATCTTG GTGCTACCGA AGTGCAGCAA
GATCGCAGCC GGTTTGGCAA AATTCTGGAA ACCTTCGTCT ATAGTGAACT GCTCAAGCAC
AGCTCTACGG CGGAAGGCGA TTATAAACTG CTCTACTACC GTGACCTTGA CATGTTTGAA
GTGGATATGG TGATCGAAAA CGCTTCCGGC CAACTGATTG GTGTTGAGGT AAAAGCCTCT
GCCACCGTCA ATGCTGGTGA TTTACGCGGT CTGAAAAAGC TGGCAAGTGT AGCAGGCGGC
CTCTTCAAAA TGGGTATTCT GCTTTATGAT GGGACAGAAA CCATGCCACT GGGTGATGGC
CTGTGGGCGG CTCCATTGTC GACATTATGG GGCCAATAA
 
Protein sequence
MNKASHYSRL IEMRIAEALA DTPVVLVAGP RQAGKTTLVR QMAIEGMRYL TLDDELTLLS 
ARNDPVGMIR SLDCAVIDEI QRAPQLLLAI KKSVDEDRRP GRFLLTGSAN LMVLPAVADS
LAGRMETLTL LPLSQSELHG STANWIDAAF AGRLLKVTMP VTGDELCEVV LRGGYPEAIS
RTDARRRTVW ARQYLNAIIQ RDVRDVASID KLDQLPRFLR ILAEISGQMC NYTKLGGQVG
LDSKTASRYT GVLEQMYLLK RIEVWARNRL KRVVKTPKLQ FIDAGLLATL LDLGATEVQQ
DRSRFGKILE TFVYSELLKH SSTAEGDYKL LYYRDLDMFE VDMVIENASG QLIGVEVKAS
ATVNAGDLRG LKKLASVAGG LFKMGILLYD GTETMPLGDG LWAAPLSTLW GQ