Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0127 |
Symbol | |
ID | 6462409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 141808 |
End bp | 143046 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642726436 |
Product | ATPase (AAA+ superfamily) |
Protein accession | YP_002017096 |
Protein GI | 194335302 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.803222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG CTTCTCATTA CTCTCGCCTG ATTGAAATGC GCATTGCTGA AGCGTTGGCC GACACTCCCG TGGTTTTGGT TGCAGGGCCG CGTCAGGCAG GCAAAACAAC CCTGGTGCGA CAAATGGCAA TCGAAGGGAT GCGCTATCTC ACACTTGATG ACGAGTTGAC GTTGTTGTCT GCCAGAAATG ATCCGGTCGG GATGATTCGC AGCCTTGATT GTGCTGTCAT TGATGAAATC CAGCGTGCGC CTCAACTGCT GCTTGCTATC AAAAAGAGTG TTGATGAGGA TCGGCGCCCC GGGCGGTTCT TGCTTACCGG ATCAGCGAAC TTGATGGTAC TGCCTGCGGT AGCGGATTCT CTGGCTGGCC GCATGGAGAC GCTCACCTTG CTGCCGCTGT CGCAAAGCGA GTTGCATGGG AGTACGGCGA ATTGGATCGA TGCGGCTTTT GCAGGCAGGC TGCTCAAGGT CACCATGCCG GTGACAGGTG ATGAATTGTG CGAGGTTGTT TTGCGGGGCG GCTATCCTGA AGCGATTTCC CGCACCGATG CACGCAGGCG TACGGTGTGG GCGCGCCAGT ACCTTAATGC CATCATTCAA CGCGATGTCC GCGATGTGGC CAGCATCGAC AAGCTCGATC AATTGCCAAG GTTTTTGCGC ATCCTGGCTG AAATATCAGG TCAGATGTGT AATTACACCA AACTGGGTGG TCAGGTCGGT TTGGACAGCA AGACGGCTTC ACGCTATACA GGAGTGCTGG AACAGATGTA TTTGCTTAAG CGCATTGAGG TCTGGGCCAG GAATCGACTC AAGCGTGTTG TCAAAACCCC CAAGTTGCAG TTTATTGATG CCGGTTTGCT GGCCACATTG CTTGATCTTG GTGCTACCGA AGTGCAGCAA GATCGCAGCC GGTTTGGCAA AATTCTGGAA ACCTTCGTCT ATAGTGAACT GCTCAAGCAC AGCTCTACGG CGGAAGGCGA TTATAAACTG CTCTACTACC GTGACCTTGA CATGTTTGAA GTGGATATGG TGATCGAAAA CGCTTCCGGC CAACTGATTG GTGTTGAGGT AAAAGCCTCT GCCACCGTCA ATGCTGGTGA TTTACGCGGT CTGAAAAAGC TGGCAAGTGT AGCAGGCGGC CTCTTCAAAA TGGGTATTCT GCTTTATGAT GGGACAGAAA CCATGCCACT GGGTGATGGC CTGTGGGCGG CTCCATTGTC GACATTATGG GGCCAATAA
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Protein sequence | MNKASHYSRL IEMRIAEALA DTPVVLVAGP RQAGKTTLVR QMAIEGMRYL TLDDELTLLS ARNDPVGMIR SLDCAVIDEI QRAPQLLLAI KKSVDEDRRP GRFLLTGSAN LMVLPAVADS LAGRMETLTL LPLSQSELHG STANWIDAAF AGRLLKVTMP VTGDELCEVV LRGGYPEAIS RTDARRRTVW ARQYLNAIIQ RDVRDVASID KLDQLPRFLR ILAEISGQMC NYTKLGGQVG LDSKTASRYT GVLEQMYLLK RIEVWARNRL KRVVKTPKLQ FIDAGLLATL LDLGATEVQQ DRSRFGKILE TFVYSELLKH SSTAEGDYKL LYYRDLDMFE VDMVIENASG QLIGVEVKAS ATVNAGDLRG LKKLASVAGG LFKMGILLYD GTETMPLGDG LWAAPLSTLW GQ
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