| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0123 |
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| Symbol | |
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| ID | 6462230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 138876 |
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| End bp | 140030 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642726433 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002017093 |
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| Protein GI | 194335299 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA GGTCTTATAT CATCGCCGGT TTGCTTGTCA CCCTGATTGC CGGCTGGTTC
CTGTGGCCGA AGGGAGCGTC AGAGCAGCGT CAGGATTCCG GCATGAAACC GGAGGTCAGT
GTCGTGACCA TGAAACCCGA GCTCCTCGTC TTGACAAAAG AGCTGCCGGG GCGGACTTCG
GCTGTACGTA TGGCCGAGAT TCGGCCGCAG GTGAGTGGCA TTGTTACGAA GCGCTTCTTC
GTGGAAGGAA GCCTTGTTCA ACAGGGTCAG CAACTCTACC AGATCGACCC CGCGACCTAC
AAGGCAGCCT GTAACAGTGC AAAAGCGAGC CTCAGCAAAG CCGAGGCCAA CGTGATATCG
CTCCAGGCCA AAGCAGGCCG CTACGAAGAG CTGGTCAAAA TCGGTGGCGT CAGCCAGCAG
GAGTATGACG ATGCGAAAGC GAGCCTTGCC CAGGCGAGGG CAGATGTCGC CATGGCCAGA
TCCGAAGTTG CTGCGGCGGC TATCAATCTC GACTACACCA GAGTCATGTC TCCGATTTCC
GGGCGCATCG GCCAATCGAA GGTGACTGAG GGGGCTCTGG TCAATGCCAA TCAGGCCGAC
CCCCTTGCTG TGGTGCAACA GCTCGACCAG ATCTATGTGG ACGTCTCCCA GTCGAGCGGG
GAGCTGATAC AACTGCGACA GCGCCATCAG GGCCAGGTGG GCGATTCCAG CGCCGGGAGC
GCTCCTATCG AGCTTCTGGT GGATGGAAAA CCCAAAGGAG AACCCGGCAC GCTGAAGTTT
TCGGATGTAA CGGTCAACCC GAGCACCGGT ACGGTGCTGC TGCGCATATT GTTCACCAAC
CCCGGCAATG AAATCCTCCC CGGCATGTTC GTTCATGCAC GTCTTGAACA GTGGAGAGAG
GAGAATGCGA TCCTCGTGCC GCAAAAATCG GTCAGCAGGA GTGCGGACGG GTCGGTTTCG
GTCTGGGTTG TCGGGCCGGA CGGCAAGGCA AACCCTCGCC CGATCATCGT TACGGAGGTT
GTCGGAGAGA GGTGGCTTGT GAGCAGCGGA CTCAAAGCAG GCGAAAAGGT CGTGTACGAA
GGCATCATGA AAATCCAGCC CGGCATGGCG GTCAAAACCG TCGAGGCTGC ACTGCCACCC
GTACCGGCGA GATAA
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| Protein sequence | MMKRSYIIAG LLVTLIAGWF LWPKGASEQR QDSGMKPEVS VVTMKPELLV LTKELPGRTS
AVRMAEIRPQ VSGIVTKRFF VEGSLVQQGQ QLYQIDPATY KAACNSAKAS LSKAEANVIS
LQAKAGRYEE LVKIGGVSQQ EYDDAKASLA QARADVAMAR SEVAAAAINL DYTRVMSPIS
GRIGQSKVTE GALVNANQAD PLAVVQQLDQ IYVDVSQSSG ELIQLRQRHQ GQVGDSSAGS
APIELLVDGK PKGEPGTLKF SDVTVNPSTG TVLLRILFTN PGNEILPGMF VHARLEQWRE
ENAILVPQKS VSRSADGSVS VWVVGPDGKA NPRPIIVTEV VGERWLVSSG LKAGEKVVYE
GIMKIQPGMA VKTVEAALPP VPAR
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