| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0107 |
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| Symbol | rpsF |
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| ID | 6462484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 122545 |
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| End bp | 122949 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642726420 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_002017080 |
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| Protein GI | 194335286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000236636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACAA ACAAACTTTA TGAATGTACG CTCATCATTG ACGGAGGGCT TCAGGATGAG
GCCATCGCCG CTGCAATGGC GTTAGTACAG AGGGTCATTA CTGAAAAAGG CGGAAGTATC
AGCAGTGTTC TCGAAATCGG AAGACGCAAG ACAGCATATC CGATCAAGAA GAAAACTATC
GGCTACTATG CCCACATCGA ATTTACTGCG GCTACATCTG TGATTGCAGA GGTTGAAAAA
GTTATTCGTT ACGAGGAAGA TCTGCTCCGT TACCTGATTA TTCATCTTAC CAGCGCACTG
CTTGAAATGC GCAAAAGGGT TGAGAAGTAT AGTGTTGTCA TAGGCAGTCC GGAAGACAGC
GCACTTGCCG AAGCCGCCGC AGCATCCGAT ACCGTTGCAA AATGA
|
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| Protein sequence | METNKLYECT LIIDGGLQDE AIAAAMALVQ RVITEKGGSI SSVLEIGRRK TAYPIKKKTI
GYYAHIEFTA ATSVIAEVEK VIRYEEDLLR YLIIHLTSAL LEMRKRVEKY SVVIGSPEDS
ALAEAAAASD TVAK
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