Gene Ppha_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0088 
Symbol 
ID6461367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp93212 
End bp93769 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content48% 
IMG OID642726391 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002017061 
Protein GI194335267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TTTTGTGTTG TATCCCTCTT GTCACAGCGT TGATGCTGCT GACGGTCGGC 
ATCACGTTGG CAGAATCGGC CAACAGCTCT TTTAACCTCG GATTTGAAAA GCATCAGCAA 
GGCGACCTTC CCACAGCCAT AAGATTGTAT TCAAAAGCCA TTGAAATTAA CCCCGCATTT 
GCCATGGCAT TCCAAATGCG GGGCATCGCA CAGCAGCAGT TAAAAAAATA TCCGCAAGCC 
ATCAGCGACT ACACCATGGC GATAACCTTT GGTGACAACG CTTTCAAAAG TGTCAACTAC 
TACAACCGGG GTATCGTAAA AAACATGACC GGCGATTTTA CCGGGGCAAT TGTTGATTTT 
TCCCAGACCA TTGCGCTCGA CAGAAAAATG GCTGAGGCAT TTTTCCACAG AGGCATCGCA 
AAAAGTAAAA TCGGTGACCT CGCCGGACGC TTTGATGACT TCCGCAATGC GGCACTCCTG 
CGCGATCATA ACGCAGAAAG ATGGCTGAAC ACCTATTATC CTGGATGGCG AGAACTGCCA 
CCCTCTCCCG CGCCATAA
 
Protein sequence
MKKILCCIPL VTALMLLTVG ITLAESANSS FNLGFEKHQQ GDLPTAIRLY SKAIEINPAF 
AMAFQMRGIA QQQLKKYPQA ISDYTMAITF GDNAFKSVNY YNRGIVKNMT GDFTGAIVDF 
SQTIALDRKM AEAFFHRGIA KSKIGDLAGR FDDFRNAALL RDHNAERWLN TYYPGWRELP 
PSPAP