| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0081 |
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| Symbol | |
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| ID | 6461471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 84553 |
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| End bp | 86646 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726384 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_002017054 |
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| Protein GI | 194335260 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.849156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AACCGCTTAA ACCTTCAAAT CCCTATAAAA ACGAACCTGA AAACAACATA
CCGCGACCGA AATTCTCGAT TATGTATTAT GTGGTCGTCA TTGTTCTGCT CATAGGAGTG
CAGCTTGCCT TTTTCTGGCA AGGCTCGACA CAGGAGATAC CCTACAGCAC TTTCCGCAAA
CTTATTGCTG AAAACAAGAT TGAATCGGTA AAAATAGCAC CGGAAAAAAT CTATATCAAA
CTCAAGCCAG GAGTTCAAAC AGGCATTGCC GTAAAAGAAC CGCCAAAGGA TGGCCCTGGC
ATGCTCCTGC CTCAGTCAGC ATCCAAACAG GATGAAATTT TTGTCAATCC GGTACGCGAT
GACACCCTCA TCGAGCTGCT GGAAAGCAAG GGAATAAAAT ATCAGGGCAT GGCGAGCAGT
ACATGGATCA GCGAACTGCT CCAGTGGATT CTCCCTTTCG GCCTGCTTAT CGGTATCTAC
TTTTTTGTCT TCCGTCGTAT GGGCGGACCG GGTTCACAAT TCATGAATAT CGGCAAAAAC
AAGGCCGCAC TCTACGAAAA CCTTGACGAG CACTCCCGCA TCACCTTCAA GGATGTTGCT
GGCCTCGACG AAGCAAAGGC TGAGGTGATG GAGGTCGTTG ACTTCCTCAA AGATCCGAAA
AAGTATACCA CCCTTGGTGG CAAACTGCCT AAAGGTGTCC TGCTGGTAGG TCCTCCGGGT
ACTGGCAAAA CCCTTCTTGC GAAAGCGGTT GCAGGCGAAG CGGACGTCCC GTTCTTCAGC
ATCAGCGGCT CGGACTTCGT AGAAATGTTT GTCGGCGTGG GAGCCGCAAG GGTACGCGAC
CTTTTTAAAC AGGCAAAGGA AAAAGCGCCT TGTATCATCT TTATTGATGA AATTGACGCT
GTTGGGCGAA GCCGCGGAAA GGGCGCCATG ATGGGCGCCA ATGATGAGCG GGAAAACACG
CTCAACCAGT TGCTTGTTGA AATGGATGGA TTTGCAACCG ACAAGGGTGT CATTCTGATC
GCCGCAACAA ACCGCCCTGA TGTGCTCGAT TCAGCCCTGC TGCGACCCGG CCGTTTTGAC
CGCCAGATCA TGGTTGATAA ACCCGATCTC AAAGGACGTA TCGACATTTT CAAGGTACAC
ACCAAATCGC TCTCCCTTTC CGAAGATGTA AACCTGAAAG CGCTGGCCTC GCAGACTCCA
GGGTTCGCAG GCGCGGAAAT CGCCAATACA GCAAACGAAG CAGCGTTGCT CGCCTCACGC
CGTAACAAGG TGAGCATTGA GATGAAAGAC TTTGAAGATG CCATAGAGCG CTGTGTGGCA
GGACTGGAAA AAAAGAACAA GGTCATCAAT CCTCGTGAAA AGCAGATTGT CGCCTATCAT
GAAGCTGGCC ATGCCATTGT GAGCTGGATG ATGCCTGAAA ACGACCCTGT TCAGAAAATC
TCCATCGTTC CAAGAGGAAT GAGTGCACTC GGCTATACCA TGAACATACC GCTCGAAGAC
CGCTATCTGA TGACAAAAAG CGAGTTGCTT GCCCGCATCT GCGGTCTTCT CGGCGGACGC
ATCGCCGAAC AGATCATTTT CAGTGAAATT TCAACCGGAG CACAAAATGA TCTTGAAAAG
GTAACGAGCA TCGCCTACAA CATGGTCATG GTCTACGGAA TGAGCGAGAA ACTCGGCAAC
CTCTCCTTCT TCGAAAGCAA TAATCCGTAT TACGGAAGTC CCGGTATTGA TAAGAAATAT
GGGGAAGAGA CTGCCCGTCT CATTGATCGG GAAGTTATGG CTATCGTAGA AGAGTCTCGC
CTGAGGGTGA TGGATCTCCT GACAGTGAAC CGCGAAAAAC TCGAAAAGCT TGCGAGTGAA
TTGCTCTTGA AAGAGATGCT TCAATACCCC CAGATTGAGG AGATTCTTGG AAAACGTCCT
GAAGGGCTTT TTCCTGTTCA GCCTGAAGAG GAGTTTGCTC CGGAAAATGG CACAGAAAGC
TCCAGGAGTT CTGCCCTTCA GAACAACAGC GATCAGTTCA GCGACAAAGA GCAGGCCGAG
CTTGAAGAGG CCGTCGCAAG ACTCAGAGGG GAACGAAAAG CAGAGGAAAA GTAG
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| Protein sequence | MAKKPLKPSN PYKNEPENNI PRPKFSIMYY VVVIVLLIGV QLAFFWQGST QEIPYSTFRK
LIAENKIESV KIAPEKIYIK LKPGVQTGIA VKEPPKDGPG MLLPQSASKQ DEIFVNPVRD
DTLIELLESK GIKYQGMASS TWISELLQWI LPFGLLIGIY FFVFRRMGGP GSQFMNIGKN
KAALYENLDE HSRITFKDVA GLDEAKAEVM EVVDFLKDPK KYTTLGGKLP KGVLLVGPPG
TGKTLLAKAV AGEADVPFFS ISGSDFVEMF VGVGAARVRD LFKQAKEKAP CIIFIDEIDA
VGRSRGKGAM MGANDERENT LNQLLVEMDG FATDKGVILI AATNRPDVLD SALLRPGRFD
RQIMVDKPDL KGRIDIFKVH TKSLSLSEDV NLKALASQTP GFAGAEIANT ANEAALLASR
RNKVSIEMKD FEDAIERCVA GLEKKNKVIN PREKQIVAYH EAGHAIVSWM MPENDPVQKI
SIVPRGMSAL GYTMNIPLED RYLMTKSELL ARICGLLGGR IAEQIIFSEI STGAQNDLEK
VTSIAYNMVM VYGMSEKLGN LSFFESNNPY YGSPGIDKKY GEETARLIDR EVMAIVEESR
LRVMDLLTVN REKLEKLASE LLLKEMLQYP QIEEILGKRP EGLFPVQPEE EFAPENGTES
SRSSALQNNS DQFSDKEQAE LEEAVARLRG ERKAEEK
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