| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0080 |
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| Symbol | |
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| ID | 6461601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 83094 |
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| End bp | 84242 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726382 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002017053 |
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| Protein GI | 194335259 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.389263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCAT TAGCTATACT CGGATCAACC GGCTCAATCG GACTCAGTAC CCTTGATGTT
GTCAGGCAGC ACCCTGAAAA ATTCAAAATT GCCGGACTGG CCGAAGGTCA CGATGTTGCA
TTGCTGGCGG AACAAATCAA AGAGTTCCTC CCGGCAGCGG TCTCCGTTCG GGATGCTGAC
TCGGTAAAAA AGTTGCAAAC ACTTCTTGGA TCGCATAAAC CGGAAATTTT TCACGGTCTC
GAAGGAGCCG CAGCAATTGC TTCCGCCGAA GGAGTGGATA TGGTCGTCTC TGCCATAGTC
GGAGCCGCCG GTCTTTTGCC GACTGTCAGT GCAATCAAGG CTGGCAAACA TATCGCCCTT
GCAAACAAAG AGACGCTCGT CGTCGCAGGC AAGCTGGTCT CTGATCTGGT AAAAAAACAT
AACGTGCACT TACTGCCTGT TGACAGTGAA CACTCAGCAA TCTTCCAGTC ACTTGCAGGC
CACCGGGCAG AGGATGTTGA ACGAATCATT TTGACCGCAT CGGGCGGACC ATTCCGCAAC
ACTTCTGCTG AAGAGCTGAA AAATGTTACG CTTGAACAGG CGCTGAAACA CCCGCAATGG
ACAATGGGGG CAAAAATCAC CATTGACTCT GCAACCATGA TGAACAAAGG CCTTGAAGTG
ATAGAGGCCC ACTGGCTCTT TTCCATGCCT GCTGAAAAAA TCGGGGTCGT CGTGCATCCA
CAAAGCATCA TTCACTCCAT GGTCGAATAT ATTGACGGCT GCGTTATCGC ACAGCTTGGC
TCGCCCGACA TGCGTGCACC AATTGCCTAT GCCCTCTCCT GGCCGGAACG CTCCGAAAGC
GGCATCCACA AGCTTGATCT GCCAAAAATC GGAACGCTGA CCTTTGAAGA GCCTGATATG
GAGCGCTTCC CTGCACTCCG CCTTGCGTTT GAGGCGCTGA AAGCAGGCTT AACCTATCCG
GCAGTGCTTA ATGCCGCAAA CGAGATCGCC GTAGCCGCAT TCCTTGACAG AAAAATCGGA
TTTACCGACA TCGCAGCAAC GGTCGAAAAA ACCATGCAGG CTCACGAAGC TTACGACCCG
ATCGAACTTG ACGAATATCT CCAGGCCGAC CGGTGGGCCC GCGAGATGGC TAAAAAATTT
ATTGCCTGA
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| Protein sequence | MRSLAILGST GSIGLSTLDV VRQHPEKFKI AGLAEGHDVA LLAEQIKEFL PAAVSVRDAD
SVKKLQTLLG SHKPEIFHGL EGAAAIASAE GVDMVVSAIV GAAGLLPTVS AIKAGKHIAL
ANKETLVVAG KLVSDLVKKH NVHLLPVDSE HSAIFQSLAG HRAEDVERII LTASGGPFRN
TSAEELKNVT LEQALKHPQW TMGAKITIDS ATMMNKGLEV IEAHWLFSMP AEKIGVVVHP
QSIIHSMVEY IDGCVIAQLG SPDMRAPIAY ALSWPERSES GIHKLDLPKI GTLTFEEPDM
ERFPALRLAF EALKAGLTYP AVLNAANEIA VAAFLDRKIG FTDIAATVEK TMQAHEAYDP
IELDEYLQAD RWAREMAKKF IA
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