| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0079 |
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| Symbol | |
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| ID | 6461121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 81642 |
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| End bp | 83003 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726381 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_002017052 |
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| Protein GI | 194335258 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.736118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTC TGAGCTCAGT ATTCTTTTTC ATTGTCGCCA TCTTCATTCT CGTTACCGCA
CATGAACTTG GCCATTTTCT GACAGCAAAA CTGTTCGGCA TGAGGGTCGA CAAGTTTTAT
ATCGGATTTG ACTTTTGGGA AAAGCGAATC TGGAGAAAGA AGATTGGCGA AACCGAATAC
GGTATTGGCG TCTTTCCTCT CGGCGGCTAT GTCAAGATTG CCGGCATGGT CGATGAAAGC
CTCGACACCA ATTTTCAGGG CTCAGATCCC CAACCCTGGG AGTTCAGGGC CAAACCAGTC
TGGCAGCGGC TGATTGTGCT TGCCGGAGGG GTCACCATGA ACCTTATTCT CGCGGCAGTT
ATCTTTTTCG GCATAACCTT TGTGCTCGGA GAAGCCCGAA CAAGTGTCAA CACTCCTGCC
TTCGTTGAAA AAGGATCCGT CTTTGAAACC ATGGGCATGA AAACCGGCGA CCGCCTGCAA
CTGGCAAACG GCAAAAAACT TGAAAGCTGG GAAGAGGCTC TCGATCCGGA GCTCTTCATC
ACCCCGTCGC TCAACTATAC CATTCTTCGC GACCAGCAAA GCATCACCCT GAAGGCTCCA
TCAAACATCC TTTCAACTAT CAACGAAACG CAGAGTCTCG GCATACGTCC AATCGTACCG
CCACTCATCG ACGAAGCTCT GGAAAACATG CCCGCCCAAA AAGCCGGAAT ACAATCCGGA
GGACTCATTA CGGCAATCAA CGGCAAAACG GTCTCCGACT GGACGGAAGT TGTCGGGATC
ATCTCTGCAC ATGCCGCCAA ACCCATCTCC ATTACCTGGC ACTACCTCAA ACCTGTCGAA
GGAGAGAAAA TAACAGCGGC GCGAATCCGT ACTGAAGGTA AAATATTTAT CGCCACGGTC
ACACCCAATG AATCCGGAAA AATCGGTATT TCACTGAAAC AGACGCTGGT AACAGAACGA
AGAAAAGTCG GTATCACGGA ATCGATGGTC AGCGGAGTGA ACCAGACATG GAAAATGAGC
GCCATGACCG TTCAGGGATT CGCCAAAATC TTCACGGGCA AGGAGGATTT TCGAAAATCA
GTAGGCGGAC CAATCAAGAT TGCCAAAATA GCAAGCCAGA GCGCTGAACA GGGGCCTGTC
AGCTTCCTTT TCTTTCTTGC CATGCTCTCC ATCTCCCTGG CGATCATCAA TATCCTGCCA
GTTCCTGCCC TTGATGGCGG CCAATTCGTG CTGAATGCAT TTGAAGGCAT CATACGCAGG
GAAATCCCTT TTGAAATCAA AATGCGCATC CAGCAGATCG GTATGGCCCT GCTGTTGTCA
CTTTTCGCAT ACATTCTCAT CAACGATCTT TTCAACCCCT GA
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| Protein sequence | MDFLSSVFFF IVAIFILVTA HELGHFLTAK LFGMRVDKFY IGFDFWEKRI WRKKIGETEY
GIGVFPLGGY VKIAGMVDES LDTNFQGSDP QPWEFRAKPV WQRLIVLAGG VTMNLILAAV
IFFGITFVLG EARTSVNTPA FVEKGSVFET MGMKTGDRLQ LANGKKLESW EEALDPELFI
TPSLNYTILR DQQSITLKAP SNILSTINET QSLGIRPIVP PLIDEALENM PAQKAGIQSG
GLITAINGKT VSDWTEVVGI ISAHAAKPIS ITWHYLKPVE GEKITAARIR TEGKIFIATV
TPNESGKIGI SLKQTLVTER RKVGITESMV SGVNQTWKMS AMTVQGFAKI FTGKEDFRKS
VGGPIKIAKI ASQSAEQGPV SFLFFLAMLS ISLAIINILP VPALDGGQFV LNAFEGIIRR
EIPFEIKMRI QQIGMALLLS LFAYILINDL FNP
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