| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0076 |
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| Symbol | |
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| ID | 6462841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 77748 |
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| End bp | 79775 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642726378 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002017049 |
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| Protein GI | 194335255 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCGT CCAGAAAGAA AGCAACACTC CTTGTCGTTG AGAGTAGTCC GCTTTTATCT
ACCTCAACAG CACGCTTCAT CAGGCAGCAG GGTTATGATG CTGTAACGGC AGATAACGGG
GAGAGCTGTA TGGAGTTCCT GAAAAGCCTC AAAATTGATG TTTTGTTTCT TGACATTGAC
ATACCAGGCA AAAATGGGAG GGAAATTCTT GCGTATGTTC ATGATCATTT TCCTGATCTT
CCGGTGATCA TGACCACATT GGTCAAGTCA GAGAGCGATG AAACGGACTC TTTTACTGCC
GGGGCGTTTG ATTATTTACT AAAACCGATC AATCGGATCA GGCTTGATAT GACGATTAAA
AAAGCGATTA CTGAATCGCA GCGTCGTCAG GAGGCGAGTC TTTTCTCCGT GGTTATCACC
AATAGTCCGA TAGCGATTGC CATTACCGAC AGAGAGGGGA ATTTTGAATA TGTCAATAAT
GCATTCTGTA GAACAACGGG TTACTCCATG GCCGATGTAA TTGGCAAAAA GCCAAGCATA
TTAAAATCAG GGGAGCAGTC AGATAGCTTT TACAAGGAGC TTTGGGATAC CATCACCAGT
GGCAGGAACT GGCAGGGAGA ATTTCATAAC AAGAAAAAAA ATGGTGAGTT ATACTGGGAG
AACTCTGTTA TCGTCCCGAT TATTGATCCC ACCTGGGCTA TTTCCCATTA TGTGAGCATC
AAGCAGGATG TTTCCCTGCG GAAAAAGGAG CTGGAGGCTT TTTCTGAAAG CGAACGTCGC
TTTCAGGAGC TTGCTGATCT TTTGCCTCAG ACTATTTTTG AAGTTGACCT TCAGGGCTGG
ATTACCTACA CCAACCGTGA GGGCTTTGAG ACCTTCGGAT ACACCCAGGA GGATTTTCAA
AAAGGAGTCC ACAGTATGTC TCTCTTTGTC CCTGAAGAGC GTGGACGGGT GATGCTTAAT
ATGGAGCGTC GGATGAAAGA TATTCCTTTT GCCGACCATG AATATACTGG ACTGAAAAAA
GATGGTACGA CCTTTCCTAT ACTTGTCTAT ACCGCAAAGA TTATTCGTAA TGGCAAGCCA
GTCGGTGTTC GGGGTATTGT GCTCGACATT ACCGCGCGCA AACAGACCGA GGAAAAACTG
CAGCAATTGA ACCAGACGCT TGAGGAGCGC ATTGAGGAGA GAACCAAAAA ACTTGAAACA
ACTCATCAGC AGATGATTCT GCATGAAAAA CTTGCTTCAA TAGGCATGCT TGCTGCCGGA
ATTGCTCATG AGCTGAATAA TCCGATCAAT TTTGTCAAGA TCAATTTTAC AACACTCAAG
GAGTCCGTTT CCGACTTTCA GGAGATGCTC AAAGAGTACC GCAGTGTCAT CAGAAGCTTT
GAGGCGGGAG AATGCAGCGC AGTTGAGCTG CAGCGGATGC ATCAGATGGA GGCCGAACTG
TATATTGATA CCCTTTTTGG CGATATTACG GAGATATTTA CTGAGTCACA GCGGGGTTTT
GAGAGAATCA CTGCGATAAT TGCGAGCATG AGGAACTTTT CGTTTAGCCA TGCTATCGAC
GAGAGGGTTC TGTTTGACAT TAACCACGGA GTCCGTGATG CACTCACTAT TGCACGCAAT
GAATACCGCA ACTGCGCTGA AATTGAAACC CTCCTTGAGG AGTTGCCACT CGTCCCCTGT
AATCCCGAGC AGATCAATCA GGTCTTTCTC AATCTTATTG TCAACAGTGC TCATGCCATA
GCATCAGCAA AGCGCAGCGT ACCTGGCAAA ATCACTATTC ATACCTGGTG TGATACTACT
GATGTATACT GTTCAGTTGC TGATGATGGG CCGGGCATCC CGCAAGAAGT TCAGAACCGT
ATTTTTGATC CGTTCTTCAC GACAAAAGAG CCTGGTAAAG GTACCGGGCT TGGGTTGAGT
ATCTCCTACG ACATTATTGT CAACAAACAT GCCGGGACAC TCTCTGTTGA ATGTCCCGCC
GGGAAGGGAA CTGTTTTTAC GCTCTCACTT CCGCTGAAGG CAGTCTGA
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| Protein sequence | MFPSRKKATL LVVESSPLLS TSTARFIRQQ GYDAVTADNG ESCMEFLKSL KIDVLFLDID
IPGKNGREIL AYVHDHFPDL PVIMTTLVKS ESDETDSFTA GAFDYLLKPI NRIRLDMTIK
KAITESQRRQ EASLFSVVIT NSPIAIAITD REGNFEYVNN AFCRTTGYSM ADVIGKKPSI
LKSGEQSDSF YKELWDTITS GRNWQGEFHN KKKNGELYWE NSVIVPIIDP TWAISHYVSI
KQDVSLRKKE LEAFSESERR FQELADLLPQ TIFEVDLQGW ITYTNREGFE TFGYTQEDFQ
KGVHSMSLFV PEERGRVMLN MERRMKDIPF ADHEYTGLKK DGTTFPILVY TAKIIRNGKP
VGVRGIVLDI TARKQTEEKL QQLNQTLEER IEERTKKLET THQQMILHEK LASIGMLAAG
IAHELNNPIN FVKINFTTLK ESVSDFQEML KEYRSVIRSF EAGECSAVEL QRMHQMEAEL
YIDTLFGDIT EIFTESQRGF ERITAIIASM RNFSFSHAID ERVLFDINHG VRDALTIARN
EYRNCAEIET LLEELPLVPC NPEQINQVFL NLIVNSAHAI ASAKRSVPGK ITIHTWCDTT
DVYCSVADDG PGIPQEVQNR IFDPFFTTKE PGKGTGLGLS ISYDIIVNKH AGTLSVECPA
GKGTVFTLSL PLKAV
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