| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0066 |
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| Symbol | |
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| ID | 6462868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 64960 |
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| End bp | 66291 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642726368 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002017039 |
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| Protein GI | 194335245 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACGA AGAGTATACT GATCAGAACC GCCGGTATCG CTGCAACAGC GCTGATGCTT
GCATGGCCAA GGCCTGCAAC AGCCGACAGC GCACCGGCAG AAGCGCCCCT CACCCTTGAT
CGTGCCATTC ATCTTGTCCG TGAAAACAAC CCGGCGCTAA AAGCCGCAGC GGAAGAGATT
ACCGCAGCAG ATGCCCGCAT CACCCAAAGC AGAAGCGCAT ATTTCCCTCA GGTAAGCGCC
AGCGCCGGAT ACACCTGGCT CGACACCGTA TCAAAAATAA GTTTCGGCAG CAGCGGAGAG
ATTCAATTCA TGCCGAACGA CAACTACGAC GCCAAAGTAA CGGCCAAGGC AACCCTGCTC
GATTTCGGAA AAAGAGGCGC CAATGTTGAT CTGGCAATGA GCGGGAAAAA AACAGCGGAA
CAGTCGCTGG AACTTGCCCG CAGGGAGCTC TCGTATCAAA CTGTGCAGCT CTTTTACGGT
ATTCTGTTTC TTCAGGAAAG TTTGCGGGTT GAAGAGAAAG AGATTGCTGC ACTCAGCAAG
GCTCTCGACT ATACGACAAA GCGTTACCAG GCAGGATCGG CCACCCGCTT CGATGTTCTC
TCCACCGAAG TACGTATTGC GGCTGCCCGA AACAGAACCC TTGATCTCCA GCATGAGCTT
CTTCGCAGCC AGTTAACCCT GCGGCGCCTG ACCGGCATAG CGGCAAACGC TCCCCTGATG
CTTCAGGGAT CATTTGCTCT GACCCCGAAC GTTCCGGTAA GCTCCGGACT TGTCGCACAG
GCTCTGGAGC AGCGTCTTGA ACTGCAACTC TCCAGAGAAA ATGAAGCTGC AGCAAAACTG
CATCGCTCCC TTGCCATGAA ACAGGGAGTA CCCGTTGTTA CCGGAAGCAT CTCATACGGC
ATCACGAACG GCTACCAGCC TGATATCAAT GAGATGCGCA ATAATGTTGC CGCTGGCATC
CACCTTGAAA TCCCGCTTTT TACTGGCTTC CGTACCAGCG CAGAGCGCCA GGAGAGCGCC
GCCCGGATGC GGGCTGCCAC CCAGCGGAGA ATCGATACCG AACAGCAGGT AAAAACTGAT
GTCGAGGAAA CCATCCACGC TCTTCAGACA GCTTCGGAAA AAATAACAAC AACCGGAGTA
CAGGTACAGC AGGCTGAACT TGCAGCACGT CACGTCAGGG CCCGCTATGA AAACGGCATG
GCCACAGCGC TCGACCTGCT CGATACGGAA GCTGCCCTCT CGCAGGCCGA ACTTGCCCGT
CTGCAGGCCG CTTACGCTTA TGTGATCAAC AACTATACGC TGAAACGGAC AACCGGGGAG
GTTTTCTGGT AA
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| Protein sequence | MITKSILIRT AGIAATALML AWPRPATADS APAEAPLTLD RAIHLVRENN PALKAAAEEI
TAADARITQS RSAYFPQVSA SAGYTWLDTV SKISFGSSGE IQFMPNDNYD AKVTAKATLL
DFGKRGANVD LAMSGKKTAE QSLELARREL SYQTVQLFYG ILFLQESLRV EEKEIAALSK
ALDYTTKRYQ AGSATRFDVL STEVRIAAAR NRTLDLQHEL LRSQLTLRRL TGIAANAPLM
LQGSFALTPN VPVSSGLVAQ ALEQRLELQL SRENEAAAKL HRSLAMKQGV PVVTGSISYG
ITNGYQPDIN EMRNNVAAGI HLEIPLFTGF RTSAERQESA ARMRAATQRR IDTEQQVKTD
VEETIHALQT ASEKITTTGV QVQQAELAAR HVRARYENGM ATALDLLDTE AALSQAELAR
LQAAYAYVIN NYTLKRTTGE VFW
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