| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0064 |
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| Symbol | |
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| ID | 6462876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 63500 |
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| End bp | 64540 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642726366 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002017037 |
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| Protein GI | 194335243 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAC CTGAATCAAA CACAATGGCT GAAAAAAATC CATCCGGAAA AGAGAGTGCG
AAAGCGAAAA GCCCTTTGCG CATGGTCATT ATCGGCCTGC TTGTCGCCCT CTCCCTGATC
TGGGGTGGAA GCAAGCTCTA CCACTCCTTC CTCTACGTTG AAACCGACAA TGCCCAGATC
GTTGGAGATA TCTATCCGGT TATTTCACGC GTTCCCGGAA GAGTTGATGC GGTACTGGCA
AGCGATAACG AGGAGGTCAA ACAGGGCGAC ACCCTGATAC GGCTTGAAGC TGCCGATTAT
GAGGTTCGCC GCGACATTGC CGCAGCCGCC TTGCTGAGTG CACAAGCCTC CGTTGCGGCC
TCAGCCGATC AGGCAAATGC TGCACAAGCG GGAGCCAATG CGGCAGGAGC AACAAGCAGA
AAGCTGCAGG CTGACCTGCG CCGCAACGAA AATCTCCGTC AGCAGGATGT CATTTCACAG
GCAGAGTTCG ATGCTGTAAA GGCCGGTGCA CAGGCCTCCT CTGCACAATA TGCTGCTGCC
GGAAACCAGT ACCAGGCATC GCTTGCCTTG GTGCCCCTGC AAAAAGCTGA GGTAAAAAAA
CGCGAAGCCG AGTTGCGCCA GGCTGAGCTT CAATTATCGT ACACCACCAT TACCGCTCCT
GCCTCCGGTC ACGTTGCAAA AAAAAGTGTC CAGCCGGGGC AATACGTAGC CCCCGGCCAG
CAGCTTATCG CTCTTGTAGG AAGCAACGAT CTCTGGATTG TAGCCAATTT CAAGGAGACC
CAGCTCGACA AAATAGCTCC CGGACTGCCG GTCACCATCA AGGTTGACGC ATACCCCGGC
AAAGAGTTCA AGGGAAAGGT GGAGTCGCTC TCTTCAGGCA CCGGCGCACA ATTCGCACTG
CTGCCCCCCG ATAACGCAAG CGGAAACTTT GTGAAGGTCA CCCAGCGTAT TCCGGTAAAA
ATCATCTTGA CCGAAAAGCC CGACAAAAGC CGCCCACTCT CCGCCGGCAT GAACGTTGTA
GTCGAGATAA AGGTCAAATA A
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| Protein sequence | MEQPESNTMA EKNPSGKESA KAKSPLRMVI IGLLVALSLI WGGSKLYHSF LYVETDNAQI
VGDIYPVISR VPGRVDAVLA SDNEEVKQGD TLIRLEAADY EVRRDIAAAA LLSAQASVAA
SADQANAAQA GANAAGATSR KLQADLRRNE NLRQQDVISQ AEFDAVKAGA QASSAQYAAA
GNQYQASLAL VPLQKAEVKK REAELRQAEL QLSYTTITAP ASGHVAKKSV QPGQYVAPGQ
QLIALVGSND LWIVANFKET QLDKIAPGLP VTIKVDAYPG KEFKGKVESL SSGTGAQFAL
LPPDNASGNF VKVTQRIPVK IILTEKPDKS RPLSAGMNVV VEIKVK
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