Gene Ppha_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0053 
Symbol 
ID6461759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp50820 
End bp53843 
Gene Length3024 bp 
Protein Length1007 aa 
Translation table11 
GC content52% 
IMG OID642726356 
ProductNon-specific serine/threonine protein kinase 
Protein accessionYP_002017027 
Protein GI194335233 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCGC TGCACATCTC CATCATTGAC GGAGTCCCGC TACTCTGGAG TGAGGGAAAA 
AAGATCGGGA TGCTGAAGGA GTTACGCCTC GCAACGGCTG GAATCGGCAT GTTTTCCCTG
CTCGACAACA CCACAAAAGA GTTTTGTGTC TGGCTGCCCT GCCGCGAGAA AAAAGCTGTC
CCATCATCTC CGCTTGTCGG CGCCATGCCC GACCTGAGTG ATGAAGAGCA ACTCCATGCC
TTTCCGATTA CCGCGCTTCG GCTGAATTTC AACGCTCTGT TCGAGCTTTC CCTGCTTACG
GAAAAGGGCA ACATCCCCGG CAGTGGCATC ATCTTCGGAA GCTCTCTCCA CTGGGCACGG
CAGGTAGTAA AAATTGCACT GAACATTGTC AGAACCCAGT CGCTGCTCCC TTCGATCATC
AAAAACGATA CATTCTGGGA GGCCTTGTGG TTGCCCCTCC CCGACAGTGC CACATCCCTC
GCAGTTGAAC AGCTTGCCGA TGCCATGCCT GCGGTCTGTC GCTCTCTCGG CCGCACCGAC
ACGCAACCGC CGGAAACACC AAAAAAGTTA CTGCTCAAAG GACTTCTCTC TTTCCTTGTC
AATACACTGT CACGTACTTT TGAAAGAGCA GGGGTGCCAA AAATCAGTGA CTTCGAGAGT
ATCCATGACG CGTGGCTTCA TGCATTATCA AACAGTGATC CCCGGCTGAA ATGGAAAAAT
GAGCAGGAGA TTGAGCAGTT TGCCTGTCAG CTCAACGCAT GGCGGCGTCC CATTGACCTG
CATGAGCGAT CACCCTTCAG GTTTTGCCTG CAACTGACAG AGCCACCACT GAAAGGGCGG
AAAAAGGAGC GCTGGCATGT TGCCTATCAA CTGCAGTTGA AAGCGGATCC AAGCCTGATT
CTTGACGCCG GGGATCTCTG GAACCCCGAA AGCGAGGCAT CACAGCACGC TTTAACGTAT
ACCTCCGATT GTACCGAATT CCTGCTTACT TCCCTGGGAC AAGCCTCCGG CCTCTGCCCC
GCAGTCACCC AAAGCCTGAA AAAGAAGCAG CCGGGTGGCT TTGATCTTGA TACCGAAGGG
GCTTACAGAT TTTTGCTGGA GTATGCGGAA CTGTTGCGAA GCGCAGGATT TGTGGTCAAG
CTTCCCTCGT GGTGGATCGG TCGCAGAGGA GTCAACCGTA TCGGGATCAA GACAAAAGTG
AAGCTTCCCT CTATGAAAGG AAGCGGGTCG GGTCTCACGC TGGATCGCAT GGTTGCCTGC
GATTATGCTG CTGCACTTGG CAATGAGGAG CTTGACCTGC AGGAGCTGAA AACACTGGCA
AACCTGAAAG TTCCGCTGGT ACGGGTGCGC GGACAGTGGA CACAGATTGA CCATAAGGAG
CTTGCCAATG CTCTCCATTT TCTTGAAAAA CATCCAACTG GTGAACTTTC TGCCAGAGAA
CTCCTCTCAA CAGCTCTCGG AGCACAAAAA AAGGAGGATG CTCTCTTTCT TCGATCGGTT
GAAATCGAGG GGTGGCTTCA GGAACTGCTT GAAAAACTTT CCTCTCAGGG ACAATTTGAA
CTGCTTCCAC CACCTGAGCA TTTCGAGGGA ACGCTTCGCC TCTATCAGGA GCGAGGCTTT
TCATGGCTCT CATTTCTCCG CAAGTGGGGA CTGGGCGCCT GTCTTGCCGA CGACATGGGC
CTTGGCAAAA CCATTCAGAC GCTTGCACTG CTGCAGCGGG AGCGTGAACT TGGAGAAAAA
AGGGCGGTGC TCCTGATCTG CCCCACCTCT GTAGTCAACA ACTGGCGAAA GGAGGCGGAG
CGGTTCACTC CGGATTTAGC GGTGCTGGTG CATCATGGTA TCGACCGGAT GAAAACAGCA
GATTTTCGCA AAGCTGCAAG CGCTTCAGCC CTTGTCATTT CAAGCTATGG ATTGTTACAG
CGCGACCTTG AATTTCTGTC GAAGGTTCCC TGGGCAGGCA TTATTCTCGA TGAAGCGCAG
AACATCAAAA ACCCTGAGAC AAAACAGTCA AAAGCTGCCC GAACAATCCG GGCTGATTAC
CGTATTGCCC TGACCGGCAC TCCCGTTGAA AATCATGTCG GCGACCTTTG GGCACTCATG
GATTTTCTCA ATCCCGGTTT TCTTGGAACC CAGCACTTTT TCAAACAGAA CTTCTACACG
CCGATTCAGT GGTATGGCGA CCCTGAGGCT TCAGCACGAC TGAAGTCGCT GACCGGCCCG
TTTATTCTGC GCCGCATGAA AAGCGACAAG TCGATTATTT CCGATCTGCC CGACAAGATC
GAAATGAAAG AGTATTGCTC GCTGACCAAA GAGCAGGCAT CGCTCTACAA GGCTGTTGTC
GATGAACTGC AGGAGAAAAT TGAAAGCGCC GAAGGGATTG ACCGGCGGGG CCTTGTACTT
GCGCTGCTGG TCAAGCTCAA GCAGGTCTGC AACCATCCGG CACATTTGCT TGGCGACAAC
TCTGCCATTG CACATCGTTC AGGAAAAATA AAACGCCTGA CCGAACTGCT TGGCGACATC
CGCGAAGCTG GCGAAAAAAC GCTGCTCTTT ACACAGTTTA CCATGATGGG AACGATGCTC
CAGCACTATC TTCAGGAGTT GTACGGTGAA GAGGTACTGT TTCTGCACGG TGGCGTAACC
AAAAAAAGGC GGGATGAGAT GGTAGAGAGC TTCCAGAAGG AAGAGGGCAG TTCACCCTCC
ATCTTTATTC TCTCACTGAA AGCCGGAGGA ACGGGTCTTA ACCTGACAAC AGCGAACCAC
GTTGTTCACT TTGACCGATG GTGGAACCCG GCAGTAGAGA ATCAGGCAAC TGACCGGGCT
TTCCGTATCG GGCAGCACAA AAACGTTGAA GTTCATAAAT TTATTACGAC GGGCACGCTC
GAAGAGCGCA TTGATGAGAT GATTGAGAAA AAAACAACGG TCGCCGGCCA GGTTCTCGGA
ACGGGTGAGC AGTGGCTGAC CGAACTGTCG AACAATGATC TGCGCAAGCT CATTATGCTC
GGACAGGAAG CAATGGGAGA ATAA
 
Protein sequence
MIALHISIID GVPLLWSEGK KIGMLKELRL ATAGIGMFSL LDNTTKEFCV WLPCREKKAV 
PSSPLVGAMP DLSDEEQLHA FPITALRLNF NALFELSLLT EKGNIPGSGI IFGSSLHWAR
QVVKIALNIV RTQSLLPSII KNDTFWEALW LPLPDSATSL AVEQLADAMP AVCRSLGRTD
TQPPETPKKL LLKGLLSFLV NTLSRTFERA GVPKISDFES IHDAWLHALS NSDPRLKWKN
EQEIEQFACQ LNAWRRPIDL HERSPFRFCL QLTEPPLKGR KKERWHVAYQ LQLKADPSLI
LDAGDLWNPE SEASQHALTY TSDCTEFLLT SLGQASGLCP AVTQSLKKKQ PGGFDLDTEG
AYRFLLEYAE LLRSAGFVVK LPSWWIGRRG VNRIGIKTKV KLPSMKGSGS GLTLDRMVAC
DYAAALGNEE LDLQELKTLA NLKVPLVRVR GQWTQIDHKE LANALHFLEK HPTGELSARE
LLSTALGAQK KEDALFLRSV EIEGWLQELL EKLSSQGQFE LLPPPEHFEG TLRLYQERGF
SWLSFLRKWG LGACLADDMG LGKTIQTLAL LQRERELGEK RAVLLICPTS VVNNWRKEAE
RFTPDLAVLV HHGIDRMKTA DFRKAASASA LVISSYGLLQ RDLEFLSKVP WAGIILDEAQ
NIKNPETKQS KAARTIRADY RIALTGTPVE NHVGDLWALM DFLNPGFLGT QHFFKQNFYT
PIQWYGDPEA SARLKSLTGP FILRRMKSDK SIISDLPDKI EMKEYCSLTK EQASLYKAVV
DELQEKIESA EGIDRRGLVL ALLVKLKQVC NHPAHLLGDN SAIAHRSGKI KRLTELLGDI
REAGEKTLLF TQFTMMGTML QHYLQELYGE EVLFLHGGVT KKRRDEMVES FQKEEGSSPS
IFILSLKAGG TGLNLTTANH VVHFDRWWNP AVENQATDRA FRIGQHKNVE VHKFITTGTL
EERIDEMIEK KTTVAGQVLG TGEQWLTELS NNDLRKLIML GQEAMGE