| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0036 |
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| Symbol | |
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| ID | 6463029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 33575 |
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| End bp | 35827 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726338 |
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| Product | methyl-viologen-reducing hydrogenase delta subunit |
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| Protein accession | YP_002017010 |
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| Protein GI | 194335216 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00274533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG ATAATAAAAT TGGAGTATAC CTCTGTACCG ACTGCGGAAT CGGAGAGATG
TTGAATGTTG ACGAACTCGA AGCCGTAGCA AAAAAAGAGT TCAAGGTACC CGTCTGCAAA
AAACATCCGT TTCTCTGTAG CCGGGAAGGT GTTCAGATAA TCAAGGACGA CATCAATAAC
GGTGAGGTCA ACAAGATTGT CATTGCCGCA TGTTCGCCAA GAGTGAATAC CGATGTTTTT
AATTTCGACC CGTTAAAGTA TGTAACCGAA CGGGTCAATC TGAGAGAACA GGTAGTCTGG
GTCAAGTCCT CGACAGAAAA GACAAACGAG GGAAGCCAGA TGATGGCTGC CGACTATATG
CGGATGGGCA TAACAAGGAT TGGCAAATCA AGTATCCCTG AACCGAAGTA CACCGATGTC
AACCGGACAC TGCTTGTGGT CGGAGGAGGC GTTACCGGCC TTACTGCAGC GCTTGAGGCA
TCAAAAGCTG GCTATAAATC CGTGCTTGTT GAAAAAGCAC GGGAGCTTGG AGGCCAGGCG
AAAAAGATGT ATAAAGTCTT CCCGACTGCA CCACCCTTTG CGGAGCTTGA AAAGCCGACA
ATACTCGCAA AAATCGAGGA GGCACGGAAC GACGGAAACA TCAGCATCCA TACGGATACC
ACCATTGCTT CCATAGAGGG CGGTCCAGGG ATGTACAAGG TCACGATTAA CAAACAGGGT
ACAACCGAGA GCTTCGAAGC TGGCGCCATT GTCCTTGCAA CAGGCTGGCG TCCCTACAAT
CCTGATAACC TTGCGCATCT CGGTTACGGA AAATTCCGCA ACGTGATCAC AAACCTTCAG
ATGGAGGAAC TTGTCACCAA AGGCAACGGC AAGGTACTCA GACCCTCCGA CGGCAAACCG
GCAAAAAACG TTGTTTTTAT CCAGTGTGCA GGTCAGAGAG ATGAAAAGCA TGTTCCCTAC
TGTTCCTCTG TTTGTTGCAA TGTATCGCTC AAACAGGCCA AATATGTCAG AGACTCGGAT
CCGGATGCTG GTGCATTTGT CATATACAAA GACATGCGTA CCCTCGGGCT GTACGAAAAC
TTCTACAAGA CATCCCAGGA TGACGAAGGC GTTTTTCTGA CCAAAGGCGA AGTTCTTGGT
CTTGAAGAGG GTCCGGGAGG AAATATATAC GTCGAAATCA ACAACCATCT TCTCGGCAGA
ACGATGAAGA TCAATGCTGA TATGGTCGTA CTTGCCACCG GCATGGTATC TGGCATGGTT
CCTGAAGACA GAGGTGTAAA TAATCTCACT CCTGAGTACA TCGGCAATTT TGTCAAGAGA
GAAACCTCTG ATGGAGAAAT CGTAGAGCTG GAGCCACTAA GTCTTGCCCT GAACCTGAAA
TACCGCCAAG GCCCTGAAAT GCCGCATCTC AAATGGGGCT TTCCTGATTC ACACTTTATC
TGCTTCCCTT ACGAGACCAA AAGAACGGGC ATCTATGCCG CTGGCGCTGT CCGCCATCCG
ATGGACGCAG TGCAGTCGGT AGGCGATGCA ACGGGCGCAG CACTTAAAGC TATCCAGTGT
ATCGAACTCA CGGCGCAAGG GCGTGCCGTG CATCCCAGAA CCTGGGATCG TACCTATCCG
GAAATCAGGG TTGAAAGCTG CACCCAATGC AGACGATGCA CGGTCGAATG CCCCTTTGGA
GCCTACGATG AGGAGAAAGA TGGCACCCCG CTTCTCTATC CTTCACGCTG TCGTCGCTGT
GGAGTATGCA TGGGCGCATG TCCACAACGG GTTATCTCAT TCAAGGACTA CAGTGTTGAC
ATGATTTCCT CTGTCCTGAA ATCAATCGAA GTCCCTGACT CGGGTACCTT TATTCTCTGT
TTTGTCTGTG AAAACGACGC CTATCCCGCA CTTGACATGC TGGGACTGAA CCGGGTTGGC
CTGAATACCA ATTTCAGGTT TATTCCCTTA CGCTGCCTCG GTGGCCTGAA TCTGGTCTGG
ATTGCCGATG CCCTCTCACA GGGTGTTGAC GGTATCCTGC TTCTCGGTTG TAAATTCGGA
GATGACTATC AGTGCCACTA TATCAAGGGC AGTCAGATGG CAAATGAACG ACTTGGAAAG
GTTCAGGAGA CTCTTAGTCG TCTGATGCTT GAATCGGAAA GGGTTGAACA GGTACAGCTT
GCTATCAATG AGTGGGAAAA ACTGCCTGGC ATTATCGAGG AGTTCTCAAA AAAAGTTGAA
GCAATTGGTG AAAATCCGTA CAAAGGATTC TAA
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| Protein sequence | MADDNKIGVY LCTDCGIGEM LNVDELEAVA KKEFKVPVCK KHPFLCSREG VQIIKDDINN
GEVNKIVIAA CSPRVNTDVF NFDPLKYVTE RVNLREQVVW VKSSTEKTNE GSQMMAADYM
RMGITRIGKS SIPEPKYTDV NRTLLVVGGG VTGLTAALEA SKAGYKSVLV EKARELGGQA
KKMYKVFPTA PPFAELEKPT ILAKIEEARN DGNISIHTDT TIASIEGGPG MYKVTINKQG
TTESFEAGAI VLATGWRPYN PDNLAHLGYG KFRNVITNLQ MEELVTKGNG KVLRPSDGKP
AKNVVFIQCA GQRDEKHVPY CSSVCCNVSL KQAKYVRDSD PDAGAFVIYK DMRTLGLYEN
FYKTSQDDEG VFLTKGEVLG LEEGPGGNIY VEINNHLLGR TMKINADMVV LATGMVSGMV
PEDRGVNNLT PEYIGNFVKR ETSDGEIVEL EPLSLALNLK YRQGPEMPHL KWGFPDSHFI
CFPYETKRTG IYAAGAVRHP MDAVQSVGDA TGAALKAIQC IELTAQGRAV HPRTWDRTYP
EIRVESCTQC RRCTVECPFG AYDEEKDGTP LLYPSRCRRC GVCMGACPQR VISFKDYSVD
MISSVLKSIE VPDSGTFILC FVCENDAYPA LDMLGLNRVG LNTNFRFIPL RCLGGLNLVW
IADALSQGVD GILLLGCKFG DDYQCHYIKG SQMANERLGK VQETLSRLML ESERVEQVQL
AINEWEKLPG IIEEFSKKVE AIGENPYKGF
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