Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0035 |
Symbol | |
ID | 6462764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 32299 |
End bp | 33480 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642726337 |
Product | heterodisulfide reductase, putative |
Protein accession | YP_002017009 |
Protein GI | 194335215 |
COG category | [C] Energy production and conversion |
COG ID | [COG1150] Heterodisulfide reductase, subunit C |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000417872 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCAAG AAACTGCATT TACACCAGAT ATCAAGTTTA TCAGGGAGCT GAAAGCTGCT GGTGCCGATA CAATGAAAAA GTGCTATCAA TGCGCTACGT GCTCTGTCGT ATGCCCATTG TCTCCTGATG ACAGGCCGTT TCCGAGAAAG GAGATGGTGA TGGCACAATG GGGACTGAAA GATGAATTGC TCAAGAGCGC CGACATCTGG CTCTGCCACA ACTGCAACGA TTGTTCCAAA TACTGTCCTC GGGGAGCCCG ACCTGGTGAT GTGCTTGCAA TATTGAGGAA AAGCGTCATT CAGGAAAACG CATTCCCCAG GATAATGGGC AAGATTGTTG GCGATCCGAA AAATATCTGG CAGGCCATGG CAATTCCTGT GCTCTTTTTT CTCGTCATCC TTGGTATCAC CGGACACCTG AACTTTCCTG AAGGAGAGAT TGTCTTCTCC AAGTTTTTTC CTGTCCACTA TATCGACATG ATTTTCGTTC CACTCTCAGC CCTTGCAGTG CTCATGTTTG CGGTCAGCAT GAGCCGGTTC TGGAAAAATA TCAGCGCAGA ATCTGGCAAC AAACTGCCGA AAGGCGATTT TCTTCCGAGC TTTATGGAGA CGCTCAAGGA GATCATGTTG CACTCAAAAT TCAGGAAGTG TGACGAAAAC AAGGATAGAG GCATAGCTCA CGTACTTGTT TTTTATGGCT TTATCGGTCT CGCAATCACG ACTGCCTGGG CAGTATTCTA TCTCTACGGG CTGAAATGGG AATCACCATA TCCGCTTGAC GATCCAGACA TTCTTGCACT GCTGGGTGGA TCAACAACCA TGGTCTGGAT TGCAAGAACC ATTTTCAAGC TTGTTGCAAA CATCAGCGCC ATTTCGCTTC TTGCCGGCGG AGTGCTGATC ATTAAAAACA GGCTTAAAGA GCGTGGATTT GAAACCAGCA CATCCTCTTT CGACTGGATA TTTGTAGGAA TCGTCCTGCT CGTAGGTCTG TCGGGCTTCC TGGCACAAGT AATGCGAATG ATGAATTTTC CGCCTGTAAT TGCATACAGC ACCTATTTCA TCCATCTGGT GCTGGTGTTT TACATCATCA TCTACATGCC TTATTCAAAG CTTGCACACT TTGTCTACAG AACCGTAGCT ATTACCTATA CCAAAATGAT GAAGCGGGAT GTAGAAATGT AA
|
Protein sequence | MAQETAFTPD IKFIRELKAA GADTMKKCYQ CATCSVVCPL SPDDRPFPRK EMVMAQWGLK DELLKSADIW LCHNCNDCSK YCPRGARPGD VLAILRKSVI QENAFPRIMG KIVGDPKNIW QAMAIPVLFF LVILGITGHL NFPEGEIVFS KFFPVHYIDM IFVPLSALAV LMFAVSMSRF WKNISAESGN KLPKGDFLPS FMETLKEIML HSKFRKCDEN KDRGIAHVLV FYGFIGLAIT TAWAVFYLYG LKWESPYPLD DPDILALLGG STTMVWIART IFKLVANISA ISLLAGGVLI IKNRLKERGF ETSTSSFDWI FVGIVLLVGL SGFLAQVMRM MNFPPVIAYS TYFIHLVLVF YIIIYMPYSK LAHFVYRTVA ITYTKMMKRD VEM
|
| |