| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0026 |
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| Symbol | dapD |
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| ID | 6462778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 24313 |
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| End bp | 25176 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726328 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_002017000 |
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| Protein GI | 194335206 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000276826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGT ATGATTCTTT AAAAGATGCG ATTTTGGGTT TTTCTTCACT TGGCGCGTCT
GCGCTCTGGG AAATTCCGGA AGCAAGGCGT GTGTTTAATC AGTTCAAGCA GTTGCTTAAT
GAGGGGCTGG TGAGGGCTGC GGAAAAATTT GAAGGAGAGT GGCGGGTCAA CTCCTGGGTC
AAGGAGGGAA TTTTGCTTGG TATGCGCCTT GGCAGATTGC AGGAGAGTTA TGTTGCGCTT
GATGAGCATG AGACAGGGTT TGCTTTTATC GACAAGGATA CCTATCCGCT TAAAAAGATT
ACGCTTGCCA ATAATGTCCG TATTGTTCCC GGAGGATCGG CTGTGCGTGA TGGATCATAT
CTGGCGCCTT CGGTGGTGAT GATGCCTCCT GCTTATGTCA ATGTTGGTGC CTATGTTGAT
GAGGGTACCA TGATAGATTC CCATGCCCTT GTGGGTAGTT GTGCACAGGT CGGTAAAAAG
GTGCATCTTT CGGCTGGTGT TCAGGTTGGT GGTGTGCTGG AGCCGATCGG CGCCATGCCG
GTCATTATTG AGGACGAGGT GATGGTCGGG GGTAACTGTG GCATTTATGA GGGCACCATT
GTGAAGGAGC GTGCGGTTAT TGGCACCGGG GTGATTCTTA ATGGGTCAAC TCCTGTTTAC
GATCTTGCCC TGAATACCAT TTACCGCAAA ACTTCCGAAT CTCCGCTGGT GATTCCTGCC
GGGGCGGTTG TTGTTGCCGG ATCACGAAAG ATCAAGGGGG ATTTTGCTGC TGAACACGGG
CTTTCCATCT ATACACCGCT GATTATCAAA TACCGTGACG ACAGGACCGA TAGCGCTACA
GCCCTTGAAG AGGCTCTCAG ATAA
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| Protein sequence | MGQYDSLKDA ILGFSSLGAS ALWEIPEARR VFNQFKQLLN EGLVRAAEKF EGEWRVNSWV
KEGILLGMRL GRLQESYVAL DEHETGFAFI DKDTYPLKKI TLANNVRIVP GGSAVRDGSY
LAPSVVMMPP AYVNVGAYVD EGTMIDSHAL VGSCAQVGKK VHLSAGVQVG GVLEPIGAMP
VIIEDEVMVG GNCGIYEGTI VKERAVIGTG VILNGSTPVY DLALNTIYRK TSESPLVIPA
GAVVVAGSRK IKGDFAAEHG LSIYTPLIIK YRDDRTDSAT ALEEALR
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