Gene Ppha_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0019 
Symbol 
ID6462784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp20484 
End bp21158 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID642726323 
Producthypothetical protein 
Protein accessionYP_002016995 
Protein GI194335201 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000499969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCG ACACAACCCT CGCCTTTCTC CGTGAGTTGA AGGGCAATAA TGAGAGAGTC 
TGGTTCACGG AGCACAAGAG CGAGTACCAG CAGGCTTATG GTGAGATGCT CGATACGGTG 
CTTCAGCTTC TTGTGGCGAT CTCTGCGTTT GACCAGGGTA TTGCCCTCTC CGGCCTTGAT 
CCAAAGAGCT GCATGATGCG CATCAACCGG GATATCCGGT TTTCAAAAGA CAAATCTCCC 
TATAAGACGA ATTTCTTTGC CTTCATCAGC AAAGGCGGAA GGAAAGGCCC CCTCGGAGGT 
TACTATCTCC ACATCGAGCC GGGTGCAACG TTTGCCGGGG GAGGCATCTA TATGCCCGAA 
GCCGCCGTTC TGGAAGAGCT CAGGCGGGAG ATTGATGCTC ATTTCGCCGA GTGGCAGTCA 
CTCATTGCTC AAAAAGAGTT CTCTTCTCAT TTTCCGGAAG GGATCCTGCC TTCAGGGAAG 
CTGGTCAGGC CGCCAAAGGG GTATGACAGC ACGAATCCGG CAATAGAGTA TCTCAAGTTC 
AAGGGGTATT ACACCCAGCG CTTTTTCACC GATGATGAAG TCACCAATCC CGGATTTGTG 
GCGGAACTTG CCAAAACATT CGGTGTAGTG AGCCCCCTTG TCCAGTTCCT GAATGGTGCT 
TTATCAAGGG AGTGA
 
Protein sequence
MITDTTLAFL RELKGNNERV WFTEHKSEYQ QAYGEMLDTV LQLLVAISAF DQGIALSGLD 
PKSCMMRINR DIRFSKDKSP YKTNFFAFIS KGGRKGPLGG YYLHIEPGAT FAGGGIYMPE 
AAVLEELRRE IDAHFAEWQS LIAQKEFSSH FPEGILPSGK LVRPPKGYDS TNPAIEYLKF 
KGYYTQRFFT DDEVTNPGFV AELAKTFGVV SPLVQFLNGA LSRE