| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0003 |
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| Symbol | |
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| ID | 6462811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2883 |
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| End bp | 3992 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642726307 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | YP_002016979 |
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| Protein GI | 194335185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0749386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATTAC AGTGTATACA TTACGAGAAT TTCAGAAACC ACCGGTTATT GAATTTTGAG
CCAAGTTATG GTATATCAAT TCTTTATGGG CCTAACGCAT CAGGAAAGAC CTCTATACTG
GAAGGGGTTC ACTATTGTGC ATTGACAAGA GGTTTTCATA ATGCACTTGA TAGTGAGTGT
CTCTATTTTT CTTCTGATTT CTTTGTTCTT GAAAGCAGTT TTCTCGATGC TACAGAACGT
GCAACAACCG TCAGAGTTCT TTATACAAAG GAAAAAGAAA AAAAAATTAT TGTTGATAAG
AGCGAAATAA AGCCTTTTTC AAGACATATT GGAAGGATTC CTTGTATTAC CTTTTCACCG
GCAGAACTGG TAATTGTTAA TGGTGCACCA GCAGAAAGAA GGCGTTTTCT TGATAATGCT
ATTTGTCAGA CAAACCGAAG ATATCTTGAC GATCTGTTGG CCTATAAAAG GGTATTGCAA
CAAAGAAATG CCCTGATTGG TCAGATGTAT GAAAAGACAG GATCACAGAA AGAGATGCTT
GCAATTTGGA CAGATAGTCT TTCACGTCTT GCAGCCTCAA TTGTTTATAC AAGAATGCAG
TTTTTATCTT CATTTTTGCC ACTTTTTCAA ACTCTCTATC AACTCTTATC GCCGGATGAG
CATCCGACCA TAGTGTATCG CTGCTCACTC GGAAAAGTTT TTCATGATAG TTCAATTGAT
CAATTGTACA GCCAATTTCT TGTAAAGTTT GAAGAGACAG AACGAGAGGA AATTTTACGT
GGGCAGACCA TGACAGGCCC ACATCGTGAT GATTTACTTT TTTTACTCCA TACCAGGGAG
ATTAAAAAAT ATGCTTCACA GGGCCAAATG CGCATCTTTC TTATAGCTCT CAAACTTTCA
CAACATCGTT TATTTTCAGA TATCCTCGGC GAAAAACCAA TTTGCCTGCT TGATGATCTG
TTCAGTGAAC TGGATGCGTC TCACTCAAAT GCCATTTTTC GTCTGCTTGA AACATGCGGT
CAAACGATTA TTACATCTGC TGAAAATAAA CCATATAGTC ACGTTGATTC AATCTCTATC
GAATCGTTGA AGGGTATAAA GGAGATGTAA
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| Protein sequence | MKLQCIHYEN FRNHRLLNFE PSYGISILYG PNASGKTSIL EGVHYCALTR GFHNALDSEC
LYFSSDFFVL ESSFLDATER ATTVRVLYTK EKEKKIIVDK SEIKPFSRHI GRIPCITFSP
AELVIVNGAP AERRRFLDNA ICQTNRRYLD DLLAYKRVLQ QRNALIGQMY EKTGSQKEML
AIWTDSLSRL AASIVYTRMQ FLSSFLPLFQ TLYQLLSPDE HPTIVYRCSL GKVFHDSSID
QLYSQFLVKF EETEREEILR GQTMTGPHRD DLLFLLHTRE IKKYASQGQM RIFLIALKLS
QHRLFSDILG EKPICLLDDL FSELDASHSN AIFRLLETCG QTIITSAENK PYSHVDSISI
ESLKGIKEM
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