Gene Paes_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2333 
Symbol 
ID6459399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2508218 
End bp2509114 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content57% 
IMG OID642726299 
ProductROK family protein 
Protein accessionYP_002016971 
Protein GI194335111 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.391774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGT TATGGGGTAT CGATCTCGGG GGAACAAAGA TCGAAGGCGT TGTGCTGGAT 
GAAGCCCTTC GTCCGCTGGT CAGGATCCGT CTTGCGACAG AAGCATGCAA CGGCTACCGT
CATGTCCTGC AGCGTATCGT CGAGCTTATC GATCGTATGG CTCTTCAGGC GGGCACATCT
CCGCCATCCA CAATAGGGAT CGGTACGCCG GGTTCGATCG ATGTGAGAAC GGGGGTGATC
AAAAACTCCA ACACGCTCTG CCTGAACGGC AAACCGTTTC GCTCGGATAT CGAGGCTTTG
CTTGAGCGGC AGGTTTTGGT TGACAATGAC GCCAACTGTT TTGCGCTTGC CGAGTACCGG
ATGGGGTCAG GAAAGATGCT CAGCGACAGC GCAACGGTTT TCGGTATCAT TCTCGGTACC
GGTGTCGGGG GAGGGATTGT CTGCGGCGGA AGGCTGCATC ATGGAGCGCA AGGTATTGCC
GGAGAGTGGG GGCACAATGA GCTGATTCCG GGAGGAGAAC CCTGCTACTG CGGCAGACGG
GGCTGTGTTG AAACGGTGAT TTCAGGCCCT GCTCTCGAAC GCTACTACTC GAACCTCACC
GGACAAGAGA AGGCTCTTGC AGCAATAGCC TCTGGCGATG ACGATGCCTC GAGGCGCACC
ATAGCGCGTC TTCAGGAGTA TTTCGGCAAG GCGCTTGCAG GTGTTATCAA CGTGCTTGAT
CCCGATATGG TTATTATCGG CGGAGGGGTC GGTAACATCG ACGCGCTCTA TAGCCAAAGC
GTCCGATACA GGATAGCGTC GCACGTGTTT AACGGATCAT TCGATACGCC TGTCGTCCGC
CCCCGGCTTG GCGACAGTGC CGGAGTTTTC GGGGCAGCAT TGCTGACAGC GTACTAA
 
Protein sequence
MKRLWGIDLG GTKIEGVVLD EALRPLVRIR LATEACNGYR HVLQRIVELI DRMALQAGTS 
PPSTIGIGTP GSIDVRTGVI KNSNTLCLNG KPFRSDIEAL LERQVLVDND ANCFALAEYR
MGSGKMLSDS ATVFGIILGT GVGGGIVCGG RLHHGAQGIA GEWGHNELIP GGEPCYCGRR
GCVETVISGP ALERYYSNLT GQEKALAAIA SGDDDASRRT IARLQEYFGK ALAGVINVLD
PDMVIIGGGV GNIDALYSQS VRYRIASHVF NGSFDTPVVR PRLGDSAGVF GAALLTAY