Gene Paes_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2322 
Symbol 
ID6459424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2497647 
End bp2498486 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content51% 
IMG OID642726290 
ProductIntegrase catalytic region 
Protein accessionYP_002016962 
Protein GI194335102 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.422805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA AAGAACATCC AGAACTCAGC ATGACACGGC AATGCGATTT GCTCTCGATC 
CACCGTTCAG GGCTGTATTA CCAGTCAAAA AAGGCGTCGA AGCTAAACCT TGAGCTTATG
GGGTTAATCG ATCATCAGTA CCTGAAAAAA CCTTACTACG GCGTGTATCG CATGTGGCAA
TGGCTACAGA GGGACAAGGG CTACAACATC AACATCAAGC GAGTCCGACG GCTGTATCGC
CTTATAGGCC TGGAAGCCAT CGGGCCGAAG CCGAACACAT CCAGGCCAGC GCCAGGGCAC
AAGATCTATC CGTATCTGCT CCGAGGTCTT GAGATTACGC ATAGCAACCA TGTCTGGGCA
ACCGATATCA CGTATGACCC CATGGCTCAT GGCTTCATGT ACCTTATGGC GGTCATCGAC
CTGAAAAGCC GCTATGTGTT GAACTGGTCA GTATCAAATA CCATGGACGC TGAGTGGTGC
GCTGAAGTCT TCAGGGACAC CGGCAGGTTA CACGGTGCCC CAGAGATCCT GAACACCGAT
CAGGGCTCAC AGTTCACCAG TGATGTCTTC ACCCGGGCAG TCATCAAAGA AGCCGGATCA
CAGCTTTCCA TGGACGGCAA GGGCAGAGCA ATCGACAATG TTTTCATCGA ACGGTTATGG
CGAAGTGTCA AGTATGAGTA CATTTACTAC AGACCTCCCG TTGACGGGCT GGAACTCTAT
CAAGGGCTGA AAGAATGGTT CACCGATTAC AATACAGATC GGAGGCATAC TGCTTTGAAT
GATGAGTTCC CAGAGACGGT TTACGAGTTT TACAAACCCA AGGCGTCAGA AGCCGCCTGA
 
Protein sequence
MVEKEHPELS MTRQCDLLSI HRSGLYYQSK KASKLNLELM GLIDHQYLKK PYYGVYRMWQ 
WLQRDKGYNI NIKRVRRLYR LIGLEAIGPK PNTSRPAPGH KIYPYLLRGL EITHSNHVWA
TDITYDPMAH GFMYLMAVID LKSRYVLNWS VSNTMDAEWC AEVFRDTGRL HGAPEILNTD
QGSQFTSDVF TRAVIKEAGS QLSMDGKGRA IDNVFIERLW RSVKYEYIYY RPPVDGLELY
QGLKEWFTDY NTDRRHTALN DEFPETVYEF YKPKASEAA