Gene Paes_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2275 
Symbol 
ID6459534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2454054 
End bp2455103 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content52% 
IMG OID642726251 
Productaminodeoxychorismate lyase 
Protein accessionYP_002016923 
Protein GI194335063 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAA CTCTAACAAG CCGCATCTTC TTTTTTTCGG CAAGCGTTCT CATCCCATCG 
CTGTGCTTTC TTGCCTTTTT TTTTCTTGGC CCGGCATGGA ATGTCGATCC GGCAGGCTAT
TCTGCAGAAA AAATCCCGGT TCACCGCGGA GCAAGCTTCC ACTCGATTAT CAGTTCGCTG
CAGGAGAGAG GGGTCGTCGT CCGCCGAAGG CCGCTGCTGA TTACCGCAGC CATTTTCCCT
AAACTCCGCA ATATCAAACC AGGCCGCTAT AGCGTCCCGG AAAAAATGTC AAACTACACA
CTGCTTGAAT ACCTCCGCTC AAGACCGCAG GATGAAGAAC AGGTAATGAT ACCCAACGGT
ATCCGTCAGG AAAAGATCGC AGCAATCGTC AGCCGGCAGC TCGACATAGA TTCCACGGCC
TTCATGCGAT CGGCAACGGA TATTCATCTC CTGAAATCGA TGAACATTGA TGCAAACAAC
GCAGAAGGAT ACCTCTTCCC GGGAACCTAC AATTTCGCAT GGGCAAGCAC ACCCGAAGAG
GTTGTAAGCT TTCTCGCCGG CCGCTTGCGG GCACTGTATA CAGACTCTCT GCTGTCAAAA
GCCGCCAAAG CAGGACTGAA TGAACACCAA TTACTGACTC TGGCCTCTAT TGTCGAAGCC
GAAACCCCGC TCGATGAAGA AAAACCGCTG ATCGCAGCAG TCTACCTTAA CCGCCTGAAA
AAAAACATGA AACTCCAGGC CGACCCCACC GTTCAATACG CGCATGGTCA GAACCCGAAA
CGCCTGCTCT ACAGCGACCT TGACATCGAC TCACCCTACA ATACATACCG CTACAGAGGC
CTGCCTCCCG GTCCGATATG CAACCCGGGC AAACCGTCGA TTCTTGCCGT GCTTAACCCG
GCCAAAACCC GCCATCTCTA CTTTGTAGCG ACAGGCGACG GAGGACATTA CTTTGCCGAA
AGCCATGCGG AACATTTGCA GAATGTCAGA AAATACAGAA ACAAGCGACG ACAGCAACGC
AACAGCACCC CCGCACCCAT GGTCCGATAA
 
Protein sequence
MRETLTSRIF FFSASVLIPS LCFLAFFFLG PAWNVDPAGY SAEKIPVHRG ASFHSIISSL 
QERGVVVRRR PLLITAAIFP KLRNIKPGRY SVPEKMSNYT LLEYLRSRPQ DEEQVMIPNG
IRQEKIAAIV SRQLDIDSTA FMRSATDIHL LKSMNIDANN AEGYLFPGTY NFAWASTPEE
VVSFLAGRLR ALYTDSLLSK AAKAGLNEHQ LLTLASIVEA ETPLDEEKPL IAAVYLNRLK
KNMKLQADPT VQYAHGQNPK RLLYSDLDID SPYNTYRYRG LPPGPICNPG KPSILAVLNP
AKTRHLYFVA TGDGGHYFAE SHAEHLQNVR KYRNKRRQQR NSTPAPMVR