Gene Paes_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2219 
Symbol 
ID6459703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2400657 
End bp2401643 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content50% 
IMG OID642726195 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_002016868 
Protein GI194335008 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.32415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TATCAACAAC ATACATGGGT CTGAAGCTTC GCAATCCTGT TATTGCGGCA 
AGCTCGGGCA TGACTGATTC CGTAGAAAAG GTTACAGCGC TTGCTTCTGC AGGAGCGGGT
GCTGTGGTTC TGAAATCGCT CTTTGAAGAA CAGATTCGCA ATGAATCGGA ATATGCTATC
GGGGCAAATG AACAGATGTA CTATTACGCC GAGGCAGAAG ACTATATTCG TGATTATACC
CGTGGAAATG ATTTGCAGAA GTATCTCGAC CTCGTTGCCG ATTGCAAGGC CGCGGTCGAT
ATCCCTGTCA TTGCCAGTCT GAACTGTGTT TCTTCTTCAG AGTGGACCAA ATTTGCCAGC
CAGATCCAGC GCGCGGGCGC AGACGCTCTG GAGCTCAATC TTTTTATGCT TCCTTCCGAT
CCGCGTAAAC AGAGCGTGCA GAATGAGGCG GTCTATTTCG ATATTCTCAA GAGGATTCAG
GAAGATGTGA GTATTGCGGT ATCGGCAAAG ATCAGTTACT ACTTTTCCGG TCTGGCAAAC
ATGGCTACCC GGCTCGCTTC GAGCGGTATC GGAGGTCTTG TTCTCTTTAA CCGTTTTTTC
TCGCCTGATA TCGATATTGA TACGTTTGAG ATTACAAGCT CAAATGTTTT CAGTTCTCCC
GAGGATCTTT ATCTCTCCCT TCGCTGGGTG GCCATGCTCT CTTCAATGGT GTCGTGCGAT
ATTGCCGCTT CTACCGGTAT TCATGATAGT TCGGCCCTGA TCAAGCAGCT TCTTGCCGGA
GCAAAGGCCG GACAGATTGC TTCCGTACTC TATCGCCAGG GGCCGGGGGT TATCGCTGCT
ATGCTTGAAG AGCTTGAAGG CTACATGCAG CGCCACGGTT TTGCTGATCT GACGCAGGTC
ATAGGACGGA TGAGCCTGCA CAATGCAGGA AATCCCGCAG CATACGAGCG CGTTCAGTTT
ATGAAGTATT TCAGTGATAT CCGGTGA
 
Protein sequence
MADLSTTYMG LKLRNPVIAA SSGMTDSVEK VTALASAGAG AVVLKSLFEE QIRNESEYAI 
GANEQMYYYA EAEDYIRDYT RGNDLQKYLD LVADCKAAVD IPVIASLNCV SSSEWTKFAS
QIQRAGADAL ELNLFMLPSD PRKQSVQNEA VYFDILKRIQ EDVSIAVSAK ISYYFSGLAN
MATRLASSGI GGLVLFNRFF SPDIDIDTFE ITSSNVFSSP EDLYLSLRWV AMLSSMVSCD
IAASTGIHDS SALIKQLLAG AKAGQIASVL YRQGPGVIAA MLEELEGYMQ RHGFADLTQV
IGRMSLHNAG NPAAYERVQF MKYFSDIR